Cucumis sativus (cucumber): 101217206
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Entry
101217206 CDS
T02486
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101217206
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101217206
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Nab2-zf4
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
101217206
NCBI-ProteinID:
XP_004143823
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Position
5:20357326..20359356
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AA seq
392 aa
AA seq
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MANFPFFSIHFCLLLITLFFQASSAGNYNVISFGAKGDERTDSTVSFLKAWASACTSPKP
STIYVPKGRFLIKGIVFKGPCKNQITFQIDGTVVAPSDYRALGNSDSWILFSKVNKVSVV
GGTLDGKGASYWACKTSGKNCPVGVPSMTFNWANNIVISGLTSINSRQTHLVINGCNNVV
VRNVKAIAPDQSPNTDGIHVQTSKGVTIIGCTLQTGDDCVSIGPGTYNLFMTNLKCGPGH
GVSIGSLGKELKEDGVQNISLKNSVFSGSDNGIRIKSWARPSKGFVRNIVFDNIVMDNVE
NPIVIDQNYCPDNKGCPRQNSGIRISKVTYRNIRGTSATPEAVSFDCSITNPCTDIKLQD
IKLLYKNKAASSSCRNVRGSSTGILMPRSCML
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggccaactttccctttttctcgatccatttctgtctcctgttaatcactctcttcttc
caagcatcaagtgctggtaattataatgtcataagttttggtgcaaaaggtgatgaaaga
acagattcaactgtttcttttctcaaggcctgggcttctgcttgtacttcacctaagcct
tctacgatttatgttcctaaaggaaggttcttaattaaaggcattgttttcaaaggccct
tgtaagaaccaaatcacgtttcaaatcgatggcacggttgtcgcaccctcggattatcgt
gctcttggcaattcagattcttggattttgttctctaaagttaacaaagtttctgtggtt
ggtggaactcttgacggcaaaggtgctagttattgggcttgcaagacgtctggaaagaat
tgtcctgttggagttccgtcaatgacattcaattgggcaaacaacattgtgataagtgga
ttaacatcgattaatagccgacaaacccaccttgtaatcaatggttgcaacaatgtggtt
gttcgaaatgtgaaggcaatagcgccggaccaaagccccaacaccgatggaattcatgtt
caaacttctaagggtgttacaattattggatgtacactacaaacaggagatgattgcgta
tcaattggtccaggaacttataatttattcatgactaatctcaaatgtggacctggccat
ggcgtaagcattggaagcttagggaaggagttaaaggaagatggagtacaaaacataagc
ttaaagaattcagtatttagcggatcagacaatgggataagaataaaatcatgggcaaga
ccaagcaaaggcttcgttaggaacattgtatttgacaacattgttatggacaacgttgaa
aatccaattgtaatagatcaaaattattgccctgataacaaaggctgtccccggcagaat
tcaggcatacggatcagcaaggtcacgtatagaaatatcagaggaacatctgccactcca
gaagctgttagttttgattgtagcattactaatccatgcacagacattaaattacaagac
atcaagcttctttataagaacaaagcagcctcctcatcctgcaggaatgttcgtggatcc
agtactggaatattgatgcctcgtagctgcatgctatag
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