KEGG   Cucumis sativus (cucumber): 101217206
Entry
101217206         CDS       T02486                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv00040  Pentose and glucuronate interconversions
csv01100  Metabolic pathways
Module
csv_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:csv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    101217206
Enzymes [BR:csv01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     101217206
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Nab2-zf4 Pectate_lyase_4
Other DBs
NCBI-GeneID: 101217206
NCBI-ProteinID: XP_004143823
LinkDB
Position
5:20357326..20359356
AA seq 392 aa
MANFPFFSIHFCLLLITLFFQASSAGNYNVISFGAKGDERTDSTVSFLKAWASACTSPKP
STIYVPKGRFLIKGIVFKGPCKNQITFQIDGTVVAPSDYRALGNSDSWILFSKVNKVSVV
GGTLDGKGASYWACKTSGKNCPVGVPSMTFNWANNIVISGLTSINSRQTHLVINGCNNVV
VRNVKAIAPDQSPNTDGIHVQTSKGVTIIGCTLQTGDDCVSIGPGTYNLFMTNLKCGPGH
GVSIGSLGKELKEDGVQNISLKNSVFSGSDNGIRIKSWARPSKGFVRNIVFDNIVMDNVE
NPIVIDQNYCPDNKGCPRQNSGIRISKVTYRNIRGTSATPEAVSFDCSITNPCTDIKLQD
IKLLYKNKAASSSCRNVRGSSTGILMPRSCML
NT seq 1179 nt   +upstreamnt  +downstreamnt
atggccaactttccctttttctcgatccatttctgtctcctgttaatcactctcttcttc
caagcatcaagtgctggtaattataatgtcataagttttggtgcaaaaggtgatgaaaga
acagattcaactgtttcttttctcaaggcctgggcttctgcttgtacttcacctaagcct
tctacgatttatgttcctaaaggaaggttcttaattaaaggcattgttttcaaaggccct
tgtaagaaccaaatcacgtttcaaatcgatggcacggttgtcgcaccctcggattatcgt
gctcttggcaattcagattcttggattttgttctctaaagttaacaaagtttctgtggtt
ggtggaactcttgacggcaaaggtgctagttattgggcttgcaagacgtctggaaagaat
tgtcctgttggagttccgtcaatgacattcaattgggcaaacaacattgtgataagtgga
ttaacatcgattaatagccgacaaacccaccttgtaatcaatggttgcaacaatgtggtt
gttcgaaatgtgaaggcaatagcgccggaccaaagccccaacaccgatggaattcatgtt
caaacttctaagggtgttacaattattggatgtacactacaaacaggagatgattgcgta
tcaattggtccaggaacttataatttattcatgactaatctcaaatgtggacctggccat
ggcgtaagcattggaagcttagggaaggagttaaaggaagatggagtacaaaacataagc
ttaaagaattcagtatttagcggatcagacaatgggataagaataaaatcatgggcaaga
ccaagcaaaggcttcgttaggaacattgtatttgacaacattgttatggacaacgttgaa
aatccaattgtaatagatcaaaattattgccctgataacaaaggctgtccccggcagaat
tcaggcatacggatcagcaaggtcacgtatagaaatatcagaggaacatctgccactcca
gaagctgttagttttgattgtagcattactaatccatgcacagacattaaattacaagac
atcaagcttctttataagaacaaagcagcctcctcatcctgcaggaatgttcgtggatcc
agtactggaatattgatgcctcgtagctgcatgctatag

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