KEGG   Cucumis sativus (cucumber): 101217230
Entry
101217230         CDS       T02486                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03030  DNA replication
csv03410  Base excision repair
csv03420  Nucleotide excision repair
csv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101217230
   03410 Base excision repair
    101217230
   03420 Nucleotide excision repair
    101217230
   03430 Mismatch repair
    101217230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csv03032]
    101217230
   03036 Chromosome and associated proteins [BR:csv03036]
    101217230
   03400 DNA repair and recombination proteins [BR:csv03400]
    101217230
DNA replication proteins [BR:csv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101217230
  DNA Replication Termination Factors
   ELG1-RFC complex
    101217230
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101217230
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101217230
  Check point factors
   HRAD17(Rad24)-RFC complex
    101217230
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_16 AAA_assoc_2 AAA_11 ATPase_2 RCF1-5-like_lid AAA_5 AAA_24 DUF815 AAA_14 AAA_7 RuvB_N AAA_30 bpMoxR AAA_19 ResIII nSTAND3 AAA_3 DNAX_ATPase_lid AAA_28 SLFN-g3_helicase TniB AAA_18 AAA_2 TIP49 Mg_chelatase AAA_25 RNA_helicase
Other DBs
NCBI-GeneID: 101217230
NCBI-ProteinID: XP_004149801
UniProt: A0A0A0KDS9
LinkDB
Position
6:complement(19120610..19132042)
AA seq 363 aa
MSEVISVMDIDDDNGNNEAEKAVKGKNVASPAAAPEGKAIPWVEKFRPKSLADVAAHRDI
VDTIDKLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGTNYHNMILELNASDDRGIDVV
RQQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
NKIIPALQSRCTRFRFAPLDNFHVTERLRYVIEAERLDVTEGGLAALVRLCTGDMRKALN
ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISFWLLNEPFSDSFKRISEIKTRKGLALV
DIVREVTLFVFKIEMPSNIRVQLINDLADIEYRMTFGCNDKLQLGSLISSFTGARSALVG
AAQ
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtcggaagtaatttccgtgatggatattgacgacgataatggcaataacgaagctgaa
aaggcagtcaagggaaaaaacgttgccagtcctgccgccgcacccgaaggcaaagcgata
ccctgggttgagaagttccggcctaagtctctcgctgatgttgctgctcaccgtgacatt
gttgacaccatcgacaagctgacgagtgaaaataggctgccacatctcctgttgtacggc
cctcctggtactggcaagacatcaactattctagcggttgctcggaagctttatggaaca
aactaccacaacatgattttggaactgaacgcatcagatgatagagggatagatgttgtt
agacagcagattcaggattttgcaagtacccaaagcttttcatttggggcaaaagcgtct
gtaaaattggtactgttggatgaggcagatgccatgactaaagatgcacagtttgcttta
cgaagagtaattgagaaatacacaaaaaatacaaggtttgctcttatctgtaatcacgtc
aataagattattccagcattacaatcaaggtgtacccgctttcgatttgccccccttgat
aactttcatgtcactgaacgactcagatatgttattgaggctgagaggttggacgtcact
gagggtggcttagctgctcttgttcgactttgcactggtgatatgagaaaggccttaaat
atcctgcagtcaacgcacatggcttctcagcatattactgaagaagctgtatacctttgc
acagggaaccctatgcccaaagacatagagcaaatatcattttggctgctgaatgaacca
ttttctgacagttttaagcgaatatctgaaataaagaccagaaaaggattggctttggtt
gatatagtgagagaagtcactctgttcgtttttaagatagagatgccatcgaatatcaga
gtccagttgattaacgatttggctgacatagagtacaggatgactttcggatgcaatgac
aagttacaactcggatcgctcatctcatcttttacaggagctagatctgctcttgttggt
gctgcacagtag

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