Cucumis sativus (cucumber): 101217340
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Entry
101217340 CDS
T02486
Name
(RefSeq) nuclear poly(A) polymerase 1 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101217340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101217340
Enzymes [BR:
csv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
101217340
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
101217340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
101217340
NCBI-ProteinID:
XP_004137491
UniProt:
A0A0A0LQF9
LinkDB
All DBs
Position
1
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AA seq
748 aa
AA seq
DB search
MGSPALCGRNNGQQRLGITDPISLSGPTEYDVLKTRELEKYLQDAGLYESQEDAVNREEV
LGRLDQIVKIWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHA
TREEDFFGELHKMLSEMPEVSELHPVPDAHVPVMRFKLSGVSIDLLYAKLSLWVIPEDLD
ISQDSILQNTDEQTVRSLNGCRVTDRILRLVPNIQSFRTTLRCMRFWAKRRGVYSNVSGF
LGGINWALLVARICQLYPNALPNMLVSRFFRVFTQWRWPNPVMLCANEEGSLGLQVWDPR
RNPKDRYHLMPIITPAYPCMNSSYNVSASTLRIMTEEFRRGHDICEVMEENKSDWDTLFE
PYPFFEAYKNYLQIDITAENDDDIRIWKGWVESRLRQLTLKIERHTYNMLQCHPYPGDFS
DKSRPFHHCYFMGLQRKQGGPASGGEQFDIRLTVDEFKHSVNVYTQRKRGMEIYVSHVKR
RSIPNFVFPGGVRPSRASKLTWDIRRSSELKASDSTQVDSPSEATESLDGDDRRKRIRID
DNANTNLRNGECLAMAHSHPEEVHEVSQVSNTSSCSIKDVNFIPTSANNLENLADVSSQN
NGDHGSLRVSPSTNNVSDAAADTSNCKEAEKLAIQKILSDSYDSHQDFPCETEELEDFDY
NNQAKDFGATKQGSPMMSSVANTSPLVLPTVSCNEARQSSSSYYNGGLEELEPAEIVAPL
STGTAPVAERKPIIRLSFTSLGKAGKSS
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggggagccctgcattatgtggccggaataatgggcagcagcggttaggcattactgat
cccatttcgttgagtgggccgacggagtatgatgtgctaaagactcgcgaactcgaaaag
tatttgcaagatgctggattgtacgagagtcaggaggatgccgtgaatagagaagaagtt
cttgggaggcttgaccagattgtgaagatttgggttaaagcaattagtcgtgcaaagggg
ttgaatgagcaactagtacaagaagccaatgctaagattttcacgtttggttcatatcgt
ttaggggtacatggccctggtgcagatattgatacgctgtgtgtgggacctagacatgca
acacgtgaagaagacttttttggtgagctacataaaatgctatcagagatgcctgaagta
tccgagttgcaccctgtgcctgatgctcatgtccctgtgatgagatttaagttatccggg
gtttccattgatcttctctatgcaaaattgtcactatgggttattcctgaagacttggat
atatctcaggattcaatacttcaaaatacagatgaacagacagttcgtagtttaaatggt
tgtcgagttactgatcgaattctgcgattagttccaaatattcagagttttcgaacaaca
ttgagatgcatgaggttttgggcaaaacgccgaggtgtttattccaatgtttctggattt
cttggtggtataaactgggcattacttgttgctcgcatatgccaactataccccaatgca
ttgccaaatatgctcgtgtctcgttttttcagggtcttcacccagtggcgctggccaaat
ccagtcatgctctgtgctaatgaagagggatctcttggacttcaagtttgggatccaaga
agaaatccgaaggatagataccatttaatgcctataattactcctgcttatccttgcatg
aattctagctacaatgtttcagcaagcactctgcgtatcatgaccgaagaatttcgaagg
ggacatgatatttgtgaggttatggaagaaaacaagagcgattgggacacactttttgag
ccctaccccttcttcgaagcatacaaaaactacttacaaatagacattactgcagaaaat
gatgatgatataagaatttggaaaggttgggttgaatctcgccttcgccaactgacattg
aagattgagagacatacgtataacatgcttcaatgccatccatatcctggagatttttcg
gacaaatccagacctttccaccattgctattttatgggtttgcagagaaaacaaggaggt
cctgcaagtgggggtgaacagtttgatataaggttgacagttgatgaatttaagcattct
gtcaatgtgtatacacagcggaagcgtgggatggagatttatgtatcgcatgtgaaaagg
aggagtataccaaattttgtctttccaggtggagttcgaccatcacgtgcatcaaaattg
acttgggatattaggcgtagttcagaactaaaagcttctgacagtactcaagttgacagc
ccatctgaagctacagaaagtttagatggggatgatagaaggaaaagaatacgtattgat
gataatgcaaatactaacttgagaaatggagagtgcttggctatggctcattcccacccc
gaggaagttcacgaagtcagccaagtcagcaacactagctcatgttccattaaggatgtg
aattttattcccaccagtgcaaataacttagaaaatctggcagatgtttcttctcagaat
aatggagatcatggatcgttacgagttagtccctccaccaacaatgtatcagatgctgct
gctgatacatcaaattgtaaagaagcagagaagttggcaattcaaaaaattttgtccgac
tcatatgactctcaccaagattttccttgtgagactgaagagctggaagattttgactat
aataatcaagctaaagattttggggccactaagcaaggtagccccatgatgtcttctgtt
gcaaacacatctcccttagtactgcctacggtatcttgcaatgaagcacgccagtcctca
agttcatattacaatgggggcttagaagagcttgagcctgctgagattgtggcgccattg
tcaactgggaccgcacctgtagctgagcgaaagccaatcatcaggttaagcttcacttcc
ttgggaaaagctggtaaaagctcgtaa
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