Cucumis sativus (cucumber): 101217343
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Entry
101217343 CDS
T02486
Name
(RefSeq) uncharacterized protein LOC101217343
KO
K08518
syntaxin-binding protein 5
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101217343
Membrane trafficking [BR:
csv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101217343
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
101217343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Lgl_C
Synaptobrevin
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
101217343
NCBI-ProteinID:
XP_011651858
LinkDB
All DBs
Position
3:28848719..28857510
Genome browser
AA seq
1116 aa
AA seq
DB search
MFAKRLLQKAIHHSQHAVQRGSLTPEDLKLRVTVHYGIPSTASILAFDSIQRLLALATLD
GRIKVIGGGGIEGLLMSPNQLPYKYLEFITNQGYLVSISNDNEIQVWSLDSRSIACCLQW
ESNITAFSIVGGSHFMYVGDENGLLSVVKFDPEDEKLMLLPYRISATSIGDVAGFSFPDD
QPSPIIGVLQHSSIGNSVLIAYANGLFLLWDVSRGQVLFVGGGKDLQLNDKLDEPSRRVD
DNVPIDALENSLADKEISALCWASSNGSILAVGYVDGDILFWKTSITASGRGQQGSPSSK
NIVRLQLSSSEKRLPVIVLHWSGNSRAPNNCDGQLFIYGGDEIGSEEVLTVLTIEWSPGL
EVLRCVGRTELKLHGSFADMILLSSPGSAGDDPKVDLFVLTNPGKLHFYEKTTLSAIIGK
SKTDSKLPVSPLEFPAMIPAAEPPMTTSKFIKLPIGGFSTKILSELASMKLSSTEIQGTS
ANWPLTGGVPYPLPTTKDDKVERVYLAGYQDGSIRVLDATHPVFSFICHLNGELEGIKVA
GLSAPVSKLDFCCATTSLAVGNECGLVRVYDLKGGADEKNFHFVTDSRREVHTLPQGKGP
QCRAVFSLLNSPVQALQFSKCGVKLGVGYGSGRIAVLDVSSSSVLLFTEAISNSSFPIIT
MIWKEHSAATHGPLESPRHSGAKSAINYAEELLLILTKDAKINVYDGSAGNVINPRSWHL
KKESIAISMYVIESGISVSGSPNEKHTQESSQNPTTKSESNPGSGATGSNLHESQHHSSA
EETRSTEKFLDSYVLLCCEDSLRLYSVNSIIQGNNKPTRKVKQSKCCWTTTFKIKERDFG
LVLLFQSGVIEIRSLPDLELLKESSLQSILMWNFKANMDKISSSSEQGQIVLTNGGEVAF
LSVLSNENEFRIPESLPSFHDKVLAAAADAAFSVSYYQKKNQLPSAGILGSIVKGFKGGK
MTPTMDFCSTRESYCAHLEKIFSKTPFSDSSSPALKNAEELTIDDIEIDDEPPAAASTSS
EEVKEEKRTERQRLFGDGNDDWKPRTRTTEEILTTYKFSGDASLAAAHARNKLMERQEKL
EKLSKRTEELRNGAEDFASLANELVKTMEKRKWWHI
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaacgattgttgcaaaaggccattcatcattctcagcatgctgtacagcgc
ggtagtttaactccggaggacttgaaactcagagtcacggttcactatggcatcccatca
acagcatcaattcttgctttcgactccattcagcggctactggcccttgcaacactagat
ggaagaataaaagtgataggtggaggtggtattgaagggcttctgatgtccccaaaccaa
ttgccttacaagtacttagagtttataacaaatcaaggttatttagttagtatctccaat
gacaatgaaattcaggtctggagtcttgacagcaggtctatagcgtgctgtttacagtgg
gaatcaaatataacagcattctccattgttggtggctcccacttcatgtatgtgggggat
gagaatggcttgttgtcagttgtcaagtttgatcctgaagatgaaaaacttatgctcttg
ccataccgtatttctgcaacttctatcggtgatgtcgcagggttttcatttcctgatgat
cagccctcacccatcattggagttctccaacactcttctattgggaatagtgtgttgata
gcatatgcaaatggcttgtttttactttgggacgtctcaagaggtcaagttctttttgtt
ggaggtggcaaggacctgcagttgaacgataaacttgatgaaccatcaagaagagtggat
gataatgttccgattgatgctttggaaaatagtttagcagataaagagataagtgctctc
tgttgggcatcctccaacggatcaattctcgctgtgggatatgtagatggagatatttta
ttctggaaaacatcaattactgcttctggcagaggtcaacaaggttcgccgtcatctaaa
aacattgttaggttacaattatcatcttcagagaaaagacttcctgttattgtcttgcat
tggtctggaaacagtagagcacctaacaattgtgatggacagttattcatctatggtggc
gatgagataggatctgaggaagttttaacggttttaaccattgagtggtcccctggattg
gaggtcttgagatgtgttggtcgtacagagctcaaactccatggctcttttgcagatatg
attttgttgtcaagtcccggttctgctggggatgatccgaaagttgatctttttgtgctt
acaaaccctgggaaactgcacttttacgagaaaactacgctgtctgcaataataggtaag
agtaagacagacagcaaactacctgtctcacctttggaatttcctgcaatgatacccgca
gcagaaccacccatgacaacgtcaaagtttattaagttgcccattgggggattctcgaca
aagattttatccgagctagcttcgatgaagcttagttccacggaaattcaaggtactagt
gcaaactggccattgactggaggagtgccctatccgttacctacaacaaaagatgacaag
gtggagagggtatacctagcaggttatcaagatggttctatacgcgttttggatgcaacc
catcctgtattttcttttatatgccatttaaatggcgagttagaaggtataaaggttgct
ggtttaagtgctcctgtatcaaaattggatttctgctgtgctactacttctttagctgtt
ggcaatgaatgtggtctggttcgggtttatgaccttaaaggcggtgctgatgagaaaaac
tttcactttgttaccgattctagacgtgaagttcacactctgcctcaaggtaaaggacct
cagtgtagagctgtcttttctctcctgaattctccagttcaggcactgcagttttctaaa
tgtggagttaaacttggtgtggggtatggaagtggtcgtattgcagtgcttgacgtttct
tcgtcatcagttttgctctttacagaggctatatctaactcaagctttcccattattaca
atgatttggaaagaacattctgctgcaactcatggccctttagagagccccaggcactcg
ggagctaaatctgcaattaattatgctgaagaattactgcttatcttaaccaaggatgca
aaaattaatgtttatgatggtagtgctggaaacgtgatcaatccccggtcatggcatttg
aaaaaggaatcaattgcgatttcaatgtatgttatagagagtggtatttcggtatctgga
tctcctaatgaaaagcatacccaggagtcatcccaaaatcctactactaaaagtgaatcc
aatccaggcagtggtgctactggatcaaatttgcatgaatcccaacatcattcttctgca
gaagaaacacgatccactgaaaagtttcttgattcatatgttctactctgttgtgaagat
tcattgcgcttgtactcagtcaactctataattcagggaaataataagcctacccgtaaa
gtgaaacagtcaaaatgttgttggactactacttttaaaatcaaagaaagagattttgga
ttggtattgttgtttcaatctggtgttattgaaataagatctttgccagatttagagttg
ctgaaagaaagctctcttcaatcgattctaatgtggaattttaaggcgaacatggacaag
atttcaagttcttctgaacaagggcagatcgttctgaccaatgggggcgaggtggctttc
ctctctgtgttatctaatgaaaatgagttcaggattcccgagtccttgcctagtttccat
gataaagttcttgctgctgccgcagacgctgcttttagtgtttcgtactatcagaagaaa
aatcagcttccatctgcggggatattaggtagcattgtcaaaggctttaaaggcgggaaa
atgacgcctaccatggatttttgtagtacacgtgaatcttattgtgcccatttggagaaa
atattttcgaagactccgttctcagattcatcatccccagctcttaagaatgcagaggaa
ctcacaatagatgatattgaaatagacgatgaaccacccgcagcagcatctacttcatct
gaggaggttaaagaagaaaagagaaccgaaaggcaaagattgtttggagatgggaatgat
gattggaagcctagaactagaacaactgaagaaattttaactacttacaaattttctggg
gatgcttctttggctgccgcacatgcaagaaacaaactcatggagagacaagaaaaacta
gagaaactgagtaagcgaacagaagaattgcgaaatggagcagaagactttgcttcgttg
gcaaatgagcttgtgaagaccatggaaaagcgaaaatggtggcatatatga
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