Cucumis sativus (cucumber): 101217447
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Entry
101217447 CDS
T02486
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101217447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101217447
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101217447
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
101217447
NCBI-ProteinID:
XP_004145749
UniProt:
A0A0A0KEK6
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Position
6:complement(10204965..10209055)
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AA seq
258 aa
AA seq
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MAKKATPTTTTYSPSPTVHKTRPSLFRTDDVNWVRPDGRGFHQCRPAFFRTGAVNAASGS
AYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQGSENKDFSSMLH
KSLEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSC
FGKNLLIDTVLEEENYQDGSLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKL
VEIMRSCLKESAVTISEE
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaagcgacaccaactaccacaacgtattctccgtctcctactgtccacaaa
accaggccatccctcttcagaaccgatgacgtcaactgggttcgccccgatggccgtggc
ttccatcaatgccgccctgcttttttcaggactggagctgtaaatgctgcttcaggatct
gcttatgcagaattcggtaataccaaggtcattgtttctgtatttggccccagagaaagt
aagaaagcaatgatgtacagtgatattggccggctcaattgtagtgttagttatacaaca
ttttccactccagttcgtggacagggatcggaaaacaaggacttctcctcaatgttacat
aaatctttggaaggggcaataatattggaatcattccccaaaacaacagtggacgtattt
gccttggtgttggaatctggaggcagtgatcttcctgttgtaatatcatgtgccagtctt
gctcttgctgatgctggaattatgctttatgatcttgttgcctcagtttctgtgagctgc
tttggcaagaatcttcttattgatactgttttggaagaagaaaactaccaagatggaagt
cttatgataacttgtatgccatctcgttacgaagtcactcagctcacaatcacaggtgaa
tggacaacttctaaaattaatgagggtatgcaactttgccttgatgcttcatgcaagctt
gtggagatcatgagatcatgcttgaaggaatctgccgtcaccatttcagaggaataa
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