KEGG   Cucumis sativus (cucumber): 101217507
Entry
101217507         CDS       T02486                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101217507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101217507
   03036 Chromosome and associated proteins [BR:csv03036]
    101217507
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101217507
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     101217507
    COMPASS/SET1 complex (yeast)
     101217507
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_SPT8 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th TRM82_WD Beta-prop_NUP159_NUP214 NBCH_WD40 PAC11 Beta-prop_NOL10_N Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_SCAP WD_LRWD1 Tricorn_2nd PD40 Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 101217507
NCBI-ProteinID: XP_004141105
UniProt: A0A0A0LFJ6
LinkDB
Position
3
AA seq 337 aa
MALTELDDATVRSMSIGAVFSDFVGKINSLDFHRKEDLLVTASEDDSVRLYDIANARLLK
TTFHKKHGADRICFTHHPSSVICSSRHNLDTNGESLRYLSMYDNRCLRYFKGHKDRVVSL
CMSPINDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPTVAYDQQGLVFAVAMEGGAIKL
FDSRSYDKGPFDTFLVGGDMAEVFDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKQCGFSL
EPSPNTTIEATFTPDGQYVVSGSGDGTLHAWNINKRAEVASWNSHIGVASCLKWAPRRVM
FVAASSVLTFWIPNATKSTGESGMEFDSHTQAEHISQ
NT seq 1014 nt   +upstreamnt  +downstreamnt
atggcgctaaccgagctcgacgatgccacggtgcggagtatgtcaatcggagccgtcttc
tcagacttcgttgggaagataaattctctggattttcatcgcaaggaagatttgctggta
acggcgagcgaggatgattccgtccgactctacgatattgcaaatgcgaggttactcaaa
accacatttcataaaaagcatggtgctgatcgtatatgttttactcatcacccaagttct
gttatttgctcctcaagacacaatctagatactaatggagagtcattgcgatacctgtca
atgtatgacaaccgatgtcttcgctactttaaaggacacaaagacagggttgtttctctc
tgtatgtccccaatcaatgacagcttcatgtcaggttctctcgaccacagtgtcaggata
tgggatcttcgtgtaaatgcttgtcagggaattcttcgcttgcgtggcagacctactgtc
gcttatgaccaacaaggccttgtgtttgctgtggcaatggaaggaggtgctattaagtta
tttgattcacgttcttacgacaagggacccttcgataccttcttagttggtggagatatg
gctgaggtcttcgacatcaaattcagtaacgatggcaaatctatgctcttgacaactaca
aataacaatatatatgttcttgatgcatatggaggagagaagcaatgtgggttcagtttg
gaaccatcgcccaacacgaccatagaggctaccttcactccagatggtcaatacgtcgtt
tcaggctcaggagatggaaccttgcatgcgtggaacattaacaagcgtgctgaggttgca
agctggaacagtcacataggagttgcctcgtgcttgaaatgggctcctcgcagagtcatg
tttgttgctgcatccagcgttcttactttctggattcccaatgctaccaaatccacaggc
gagtcgggtatggaattcgattctcatactcaagccgaacatatatctcaatga

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