Cucumis sativus (cucumber): 101217533
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Entry
101217533 CDS
T02486
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101217533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101217533
03036 Chromosome and associated proteins [BR:
csv03036
]
101217533
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101217533
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101217533
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleopor_Nup85
EF-hand_5
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
101217533
NCBI-ProteinID:
XP_004148390
UniProt:
A0A0A0LLY0
LinkDB
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Position
2:20257410..20264011
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AA seq
720 aa
AA seq
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MPGPASDSSPSGALVLSSWEAREVVYPIRHELKPPIARLSISWARGNSFRVSIFTQHPAN
HTSDSNDGEVGGQVLEVKIRNGDGEISAAEFRRIAYGSVSPFALLQSRKHMVSGLSKMSM
GLPRFNPDGWEYLAEYSKDISSVIGNPKLIPSSAIEDPLEILKKVEEPTCLKAAWELMDV
FYADKQSHWWLNERLVDWLAEYDSVLSTTQSTIHSKLVDFQKELNNLQVVEDNPRYWDVI
LSALAVGWQEIVVKMLRLHGSYQLDQLSRRETENGLVEAVAFLISEMPRMRPELDSGKFG
QCFKTKPDFTKAWEKWRSKITKLDGSGFWVHCTHVQTRKGLQNMLRIILGDVESLSGATC
NWMELYISQLLYVRPFSMGLESMYNLAEKCMQLKPASNTDRLMALIIGILGESPEIVLAE
CSRGFGPWMATHAMELLIEENDEAETLLHEERHDLGGVSIEELHRLVYAQVLCSHAFTWQ
IAPIYLTSCAKQGIGFLETLLYSQAVQHNGVLLKNLEICRLYELDSLSSNIMKIAGVYHW
KHGRKGCGVFWLKQARDEVRLNKIAQQLFDSVGKSISDESFKQWEGLIELLGSESKNTGG
LEFLHKYRDFKKSLHQVHQKGKTTGAAQSAVDSLIALMKNPSTPQRFWLPILNDSLKLID
WHGGPLLNTEQTNLLLNKLQELSMAKLRPDFVESDLPPLALSSIRLALAKNLGRAFLEGC
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccaggccctgcttccgattcttctcccagcggtgcactagtcttgtcctcttgggag
gcccgagaagtggtctaccctatccggcacgaacttaagcctcctatagctcgattatcc
atttcctgggccagaggcaactccttccgtgtttcaattttcacgcagcatcctgccaac
catacttcagattctaatgacggtgaagttggcggacaagtattggaggtgaagatcaga
aatggagacggagaaattagtgctgcagagtttcggaggatcgcgtacggttcagtctcc
ccctttgcgcttcttcagagtcggaaacatatggtttcgggattgtcgaagatgtccatg
ggtttaccacggtttaatccggacgggtgggaatacttagcggagtatagcaaggacatc
agctcagttattggtaatccgaagttaattcctagctcagcgattgaggacccgctggaa
attttgaagaaagtcgaggagcctacttgtctgaaagctgcatgggagctgatggatgtg
ttttatgcagacaagcaatctcattggtggcttaatgaacgccttgttgattggttagct
gaatatgatagtgttctctcaaccacacaatcaactatccattcaaaacttgttgatttt
caaaaagaacttaataacttacaggtagttgaggataatccacgctattgggatgtgatt
ttatcagcattagcagttggctggcaagaaattgtggtgaaaatgttgcgcttacatgga
tcgtaccagctggatcagcttagccgtcgggagacagagaatggcctggtagaggcagtg
gcttttcttatttcagaaatgccacgcatgcgcccagagttggattctggtaaatttggt
caatgcttcaaaaccaagcctgattttaccaaggcatgggaaaaatggcggtcgaaaata
accaagttagacggctctgggttttgggttcattgtactcatgttcagaccagaaaaggt
ttgcagaatatgcttcggatcattctaggagatgttgaaagcctcagtggtgcaacctgc
aattggatggagctgtatatctctcagcttttatatgtcagaccattttcgatgggtcta
gaaagcatgtacaacctggcagaaaaatgtatgcagttaaaaccagcttctaatactgat
cgcttgatggcactaattattggaattcttggagaaagtccagagattgttttggcggag
tgttctagaggatttggcccctggatggctacacatgctatggaattgttgattgaagag
aatgatgaagcagaaactcttctacatgaagagcgccatgatcttgggggagtcagcata
gaggaacttcatcgtcttgtttatgctcaagttctctgttcacatgcatttacttggcag
atagctccaatttacttaacatcatgcgcaaagcagggcattggttttttagaaacgttg
ttatacagtcaagcggttcaacataatggggtgctgcttaagaatttagagatatgtcgt
ttatatgaactcgacagccttagttcaaacattatgaagattgctggagtttaccattgg
aagcatggcaggaagggttgtggcgttttttggcttaaacaagctagggatgaagttcgt
cttaacaagattgctcagcaattgtttgattcagttggaaagtccatatctgatgaaagt
ttcaagcaatgggaaggattaatcgaattgttgggttctgaatctaaaaatactggaggc
ctcgagtttctccacaagtacagggatttcaaaaaatcgctgcatcaggttcatcagaag
gggaaaaccacaggtgctgcacaatctgcagtagactccctcattgcgcttatgaagaac
ccttcaacacctcagcgcttttggctaccaattttaaatgactcgttgaagcttatcgat
tggcacggaggtcctctgctaaacactgagcagaccaaccttttgttgaataaactacaa
gagctgtccatggcgaagcttcgacctgacttcgtcgaatctgacttgccacctctggcc
ttgagctccatcagattagctcttgcaaaaaatcttggacgtgcttttctcgaggggtgt
tga
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