Entry |
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Name |
(RefSeq) tRNase Z TRZ3, mitochondrial
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KO |
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Organism |
csv Cucumis sativus (cucumber)
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Brite |
KEGG Orthology (KO) [BR:csv00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:csv03016]
101217593
Enzymes [BR:csv01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
101217593
Transfer RNA biogenesis [BR:csv03016]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
101217593
Prokaryotic type
101217593
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
7:21116280..21120905
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AA seq |
977 aa
MPLPHLSTLRFLFFSPSKLPFSPSLYSPKSHSLFTVLASSPPKRRRSATAPPSLNFKRRN
SSSLRETKGKENSVPMEETEATSFGFNKRRAEGRDKTDLPKKNLQLKVRKLNPANTISYV
QILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHIFLSRVCSETA
GGLPGLLLTLAGIGDVGMSVNVWGPSDLKYLVDAMKSFIPNAAMVHTRSFGPTVSSDADA
VHELSKCREPIVLVDDEVVKISAILVHPRPNRRLGLFDEDDMGHSQEQRRNDNSEARSST
TKTSSTVKPGDMSVVYVCELPEIKGKFDPSKAAALGLKPGPKYRELQLGNSVMSDHQKIM
VHPSDVLGPSVPGPVVLLIDCPTESHLSELMSLESLRPYYEDLSSDQTETGKVVTCVIHL
SPASILGNPNYQKWARRFESAQHIMAGHHRKNVAIPILRASAKIAARLNHLCPQLFPAPG
FWSHQQLTMPGSDSCASTEIEVSNHYKSTLAENLLKFTLRPYAQLGFDRSNIPSQESLPE
IINALHSEIPEIVDAVEHVSQLWRGSAETDERTPVEENNAMVEEPWLDENKVPSCLENIR
RDDLEIVLLGTGSSQPSKYRNVSSIYINLFSKGSMLLDCGEGTLGQLKRRYGVEGADAAV
RSLRCIWISHIHADHHTGLARILALRRDLLREVPHEPVLVIGPRQLRRYLNAYQRLEDLD
MQFLDCKDTTEASLEAFQKLASDIDNSPSESPISSTNENSTLIDGTIGRKTESSLFVKGS
RMQSYWKGPSSPVDINAAVPLLKCLNEVLNEAGLEALISFPVVHCPQAYGVVLKAAERVN
LDGKVIPGWKIVYSGDTRPCPKLMEASRGATLLIHEATFEDSLVDEAMAKNHSTTSEAID
IGNSAGAYRIILTHFSQRYPKIPVVDEKHMHKTCIAFDLMSVNVADLSVLPKVLPYLTLL
FRDEMMVDESDDVTMES |
NT seq |
2934 nt +upstreamnt +downstreamnt
atgccattgccgcacctatcaactcttcgcttcctcttcttctctccttctaaacttccc
ttttccccttctctatactctcctaaatcccattctctcttcactgttctcgcatcttct
ccaccaaaacgccgccgtagcgctactgcccctccgtctctgaatttcaaacgtagaaac
agtagcagtctcagagagaccaaagggaaagagaactcggttcctatggaggaaactgag
gctacgtcttttgggtttaacaagaggagggcagagggcagagataaaactgatttgcct
aaaaagaatcttcagcttaaagttagaaagttgaatcccgccaatacgatttcttatgtg
cagatactgggaactggaatggatactcaagatacgtcgccttcggtcttgcttttcttt
gataaacaaagattcatttttaatgctggagaggggttgcaacgattctgcacggagcat
aagattaagttatccaagatagatcatatattcctttcccgcgtatgttcggagactgct
ggtggacttcctggtttgctgctgactttggctggcattggagacgtaggaatgtctgtc
aatgtctgggggccttctgatttgaagtatttagttgatgcaatgaagtctttcatacca
aatgctgccatggttcacacacggagctttggacctacagttagttctgacgcggatgct
gtccatgaattgagtaagtgtcgtgagcccattgttcttgttgatgatgaggtagtcaag
atatcagcgattttggtacatccaaggccaaatagaagattagggctgtttgatgaagat
gacatgggccatagtcaagaacaaagaagaaacgataattccgaagctagaagttcgaca
accaaaacttcatctacagtaaagccaggtgacatgtctgtagtatatgtatgtgaactt
cctgagattaaggggaagttcgatccatcaaaagcagctgcacttggccttaaacctggg
ccaaaatatcgtgaactacaacttgggaattcagtgatgtctgatcaccaaaaaatcatg
gttcatccaagtgatgtccttggcccctcagttcctggtccagttgtgttacttatcgat
tgtccaacggaatctcatttgtcagagttgatgtctttggaatctttgagaccttattat
gaagacttatcgagcgatcagactgaaactggtaaggtggtaacatgcgttattcatcta
agtcctgcttctattcttggtaatcctaattaccagaaatgggcgaggagatttgagtca
gcccaacacatcatggctggccatcatagaaagaatgtcgcgattccaattttaagagcc
agtgcaaagattgctgcaaggcttaatcatttgtgtcctcaattatttccagccccaggg
ttctggtcccatcagcagcttactatgccaggatcagattcatgtgcttcaactgagata
gaagtttcaaatcattacaaaagcacattagctgaaaatcttctaaagttcaccttgcgc
ccttatgcacaacttggattcgatcgatctaatattcccagtcaagaatctttgccagag
attattaatgcgctgcattctgaaataccggaaattgtggatgctgtcgaacacgttagt
cagctttggcggggttctgctgaaacagacgagagaactcccgttgaagagaataatgca
atggttgaagaaccatggctcgatgagaataaagttccaagttgtctggaaaatattagg
agagatgacttggaaattgttcttcttggtacagggtcgtcccagccatccaagtacaga
aatgtcagttctatttacattaatcttttctcaaaaggaagtatgctcttagattgtggg
gaaggaaccttgggtcagcttaaaagaagatatggagtagagggtgctgatgctgctgtg
aggagcctaagatgtatttggatttctcatatccatgcagatcatcacacaggactggcc
agaatactagctttacggcgtgatctgttgcgggaagtaccccatgaacctgtactagta
atcgggccaagacagctgagaagatatttgaatgcgtaccagaggttagaagatttagat
atgcagttccttgattgtaaggacacaacagaagcttcattggaagcttttcagaaactt
gcttcagacattgacaactcgccctcagaaagtcccatcagttccacaaatgaaaacagc
acactgatcgatggaaccatcggacggaaaaccgagtctagtttattcgtcaaaggatct
cgtatgcagagctactggaagggtcctagcagtccagttgatatcaacgcggctgtgcca
cttcttaaatgcttgaatgaagttctgaatgaagctggcctggaagctttaattagcttc
ccagttgtacactgtccacaggcttatggcgtagtcttaaaggctgctgaaagggttaat
ttagatggaaaagtgatacctgggtggaagattgtttactcaggtgacacccgtccttgt
cccaagctgatggaagcatctcgtggtgctacacttcttatacacgaggcgacttttgag
gacagcttggtggatgaggccatggcaaaaaaccacagcacaacttcagaggcaatagac
ataggaaactctgcgggagcgtatagaatcatccttacgcatttcagccaaagataccca
aaaattcctgtggtcgatgagaaacacatgcacaagacttgcattgcattcgatttgatg
agtgttaatgtggcagatctatcggtacttcctaaggttcttccctacttgacacttctt
ttcagagatgagatgatggtagatgaatctgatgatgtcactatggagtcgtag |