Cucumis sativus (cucumber): 101217628
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Entry
101217628 CDS
T02486
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101217628
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csv01002
]
101217628
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101217628
03036 Chromosome and associated proteins [BR:
csv03036
]
101217628
03400 DNA repair and recombination proteins [BR:
csv03400
]
101217628
Peptidases and inhibitors [BR:
csv01002
]
Metallo peptidases
Family M67
101217628
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101217628
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
101217628
BRISC complex
101217628
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
101217628
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
101217628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
101217628
NCBI-ProteinID:
XP_004152213
UniProt:
A0A0A0KWR1
LinkDB
All DBs
Position
4:791577..797106
Genome browser
AA seq
436 aa
AA seq
DB search
MSLTAVKMSEDVWFTCLTHALSTETEEIMGLLLGDIEHSKNGSVTALIWGASPQTRSDRR
KDRVETHPEQLAAASAQAERMTAMTGRTTRVIGWYHSHPHITVLPSHVDVRTQGTYQLLD
SGFIGLIFSCFSEDANKVGRIQVIAFQSSDGKQNHLSRPISLSPVYRNSVIDVESSLSSS
DNVSGNVGYGPGENPEQDTGDSMIAGALKGTGRSSELGYFFANADTNYQGKEKIGGSYLI
NNTNSGITDIDPMDLSESMQEAMHRSNIEMSAAEFSRKEIPLHVMPTASLIKLDSPLTSF
TDLQHVLFEEERSAYNQAISNNMKDGKVHPLTFIHHTSTYQASMCKLIEYCLSPAISALQ
DRVKENEIRLALLAEEARNLEVEAAKANESVPGSPHQVTHGSRASASPTHRDLYPSTASV
GARSGGSSMYRSRKGL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgacggccgtgaagatgtctgaagatgtctggtttacttgtctcactcatgca
ttatccaccgagactgaagaaatcatgggccttctccttggcgatattgagcattcgaaa
aatggtagtgtaactgcactaatttggggggcatcgcctcagacacggtctgacagaagg
aaggaccgtgtggagactcatcctgaacaattggctgctgcatcagcccaggccgagaga
atgacagcaatgactggtagaacaactagagttattgggtggtaccattcacatcctcat
attacagtgcttccttcacatgttgatgtgcgaactcaagggacatatcagctccttgat
tctggatttattgggctgatattttcttgctttagtgaagatgcgaacaaggttggaaga
attcaagttattgctttccaatcctctgatgggaaacagaatcacttgtcaagacctatt
tctttatctcctgtatatcgaaattcggtgattgatgtggaatcttctttaagttcctct
gataatgtatcaggaaatgtgggttatggaccaggagagaatccggaacaagacactggt
gattcaatgattgctggagctcttaagggtactggacgatcttcagagttgggttatttt
tttgctaatgccgacaccaactatcaaggaaaagagaaaattggtggaagttatcttatt
aataatacaaatagtgggattactgatatcgatccaatggacttgtctgaaagtatgcaa
gaagcaatgcaccgttcaaatattgaaatgagtgctgctgaattttcaaggaaagagatt
cctcttcatgttatgccgactgcatcgctcataaagcttgattcaccattgacatctttt
acagatttacagcatgttctgtttgaagaggagagatcagcttataaccaagccatctcg
aataacatgaaggatgggaaagtgcatccgctgacgttcatacatcacacatcaacatat
caggcttcaatgtgcaagttaattgaatattgtcttagtcctgccataagtgcgcttcag
gaccgcgtaaaagagaatgaaattcggttagctttgctggccgaggaagccaggaatctg
gaagttgaggctgcaaaagcaaatgagtcagtcccaggatcacctcatcaagttactcat
ggatctcgagcaagtgcttcaccaacccacagggacttgtatccttcaactgcctctgtt
ggtgcacgtagtggaggaagctctatgtaccggagtaggaaggggttatga
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