Cucumis sativus (cucumber): 101217922
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Entry
101217922 CDS
T02486
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101217922
Enzymes [BR:
csv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101217922
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101217922
NCBI-ProteinID:
XP_004146792
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All DBs
Position
6:complement(20103237..20105322)
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AA seq
435 aa
AA seq
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MAVFSSLFVCSLLFFVVANANVDEDEYWQTRATEAKKVAQGAFNANPEIVTDTLNAAVSR
TMLGHNSTRRSLRKKYRGPCLATNPIDRCWRCDRNWAKNRRKLAECPLGFGHQTIGGKRG
PIYVVTDASDDDLVNPKPGTLRHGVIQKGPLWIIFGRSMVIRLSQELMISSHKTIDARGA
NVHIAFGAGLTIQFVNNVIIHNLHIHDIVSKSGGMIRDSVDHYGFRTQSDGDGISIFGSS
HVWIDHVSMSNCQDGLIDAIMGSTAITISNCHFTHHNEVMLFGASDSYAEDEIMQVTLAF
NHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIVSQGNRFIAPPNPNAKQI
TKREYAMEDEWKHWSWRSEGDELMNGAVFIASGDQTKGKKKGLSRYDMISFKPGTYVRRL
VRLSGTIECTPGKPC
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctttagttccttgtttgtgtgttcgttgctgttttttgtggtagcaaatgcc
aatgtagatgaagatgaatactggcaaacgcgtgccactgaagctaagaaagttgcacaa
ggtgccttcaatgctaaccctgaaattgttaccgataccttgaacgctgctgttagtcga
acgatgttgggtcacaatagtacgagaaggagcctaaggaagaagtatagaggaccatgc
ttggcaacgaaccccattgatagatgttggagatgcgatcgaaattgggctaaaaaccga
cggaagctagcggaatgtccattggggttcggccaccaaaccattggcggaaagagagga
ccaatctacgtggtgacagacgcgtctgacgatgacttggttaatcctaaacctggaacc
ctacgacatggtgtgatccaaaaaggcccactttggatcatcttcgggagaagcatggtc
attaggctgagtcaagagctaatgatctcaagccacaagaccattgacgctcggggggct
aacgtccacattgcctttggcgctggtctcaccattcaattcgtcaacaatgtaatcatt
cataaccttcacatccatgacatcgtatctaaatcgggtggaatgattagagattcagtg
gatcattatgggttcagaacacagagcgatggcgatggcatctccatctttggttcttct
catgtttggatcgaccacgtttccatgtccaattgtcaagatggtcttattgacgccatc
atgggttccacagcaatcactatctccaattgtcatttcactcaccacaacgaggtgatg
ttatttggagcgagcgatagctacgcagaagacgaaattatgcaagtaaccctagcattc
aaccactttgggagaggattggtgcaaaggatgccaaggtgtagatggggtttcttccat
gttgttaacaatgactacactcattggcttatgtacgcgatcggcggtagccaacatcct
accattgttagccaaggcaatcgtttcatcgctcctccaaaccccaatgccaaacagata
acaaagagagaatatgcaatggaagatgaatggaagcattggtcatggagatcagaagga
gatgagttgatgaatggagcagtgtttattgcatcaggtgaccaaacaaaagggaagaag
aaaggtttatcaagatatgatatgatttccttcaagccaggaacctacgtcagaagactt
gtacgcctttctggcacaattgaatgcaccccaggcaaaccatgctag
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