KEGG   Cucumis sativus (cucumber): 101217931
Entry
101217931         CDS       T02486                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03020  RNA polymerase
csv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101217931
  09124 Replication and repair
   03420 Nucleotide excision repair
    101217931
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101217931
   03400 DNA repair and recombination proteins [BR:csv03400]
    101217931
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     101217931
  RNA polymerase III system
   RNA polymerase III
     101217931
  RNA polymerase I system
   RNA polymerase I
     101217931
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101217931
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N HNHc_6 NA-iREase1 DUF3557
Other DBs
NCBI-GeneID: 101217931
NCBI-ProteinID: XP_004148944
UniProt: A0A0A0K8L9
LinkDB
Position
7:complement(16762575..16766155)
AA seq 207 aa
MVLSEEEITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKSK
RNDSSDQIYVFFPEEAKVGIKPLKTYTTRMKSENVFRAILVVQQNLTPFARACMSEATSK
SFHLEVFQEAELLVNIKDHVLVPEHQLLNNEEKKTLLERYTVKETQLPRIQVTDPVARYY
GLKRGQVVKIIRPSETAGRYVTYRYVV
NT seq 624 nt   +upstreamnt  +downstreamnt
atggtgctatcagaagaggaaatcaccaggcttttcagaattcgaaaaactgtgtttcaa
atgctaagagaccgaggctattttgttggagactttgagattgacatgacaagggagcaa
tttaagcaaaaatatggtgaaaacatgaaaagagaagacattgttattaataaatccaag
agaaatgatagcagtgatcagatatatgttttttttccagaagaggcaaaggttggcatc
aagccgttgaaaacatataccacccgaatgaaatcggagaacgtttttagagcaatattg
gtcgtccaacagaatttgacccctttcgcccgtgcctgtatgagtgaagcaacttccaaa
tcattccacttggaagttttccaggaagcagaattgctagttaatatcaaagatcacgtc
cttgttcctgagcaccagttacttaacaatgaagagaaaaagacactacttgagagatat
accgtgaaagaaacacagctaccgcgcatacaagtgactgacccggttgcacgatattac
gggctaaagcgtggccaagttgtgaagatcatcagaccaagtgaaactgcaggaagatat
gtaacttacagatatgttgtctga

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