Cucumis sativus (cucumber): 101217986
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Entry
101217986 CDS
T02486
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
csv03015
mRNA surveillance pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101217986
09122 Translation
03013 Nucleocytoplasmic transport
101217986
03015 mRNA surveillance pathway
101217986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101217986
03041 Spliceosome [BR:
csv03041
]
101217986
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101217986
TREX complex
101217986
Spliceosome [BR:
csv03041
]
Complex C
Other components
EJC/TREX
101217986
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101217986
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_11
YHR127W_C
RRM_3
RRM_10
PRR20
Btz
EBNA2_Core
Motif
Other DBs
NCBI-GeneID:
101217986
NCBI-ProteinID:
XP_004143092
UniProt:
A0A0A0KBU2
LinkDB
All DBs
Position
6
Genome browser
AA seq
237 aa
AA seq
DB search
MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQ
HDMFADPSSGFLVQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDK
SGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFEN
SNGAPRRQQGRGGPPSRQRGHGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcctttggatatgagtcttgacgatatcataaagaacaacaagaaatccaga
tccggaaattctagaggtcgaggaagaggttctggacctggtcccgtccgtagattcccc
aatcgcgccgctaaccgcacaccttattccgctcccaaggcgccggagacgacgtggcaa
catgatatgttcgccgatccgagttctggatttctggtgcaaggtgggcgagcttctgct
attcagactgggactaagctttatatatctaatttggattacggtgtatctaacgaagat
attaaggaacttttttctgaagttggtgatatgaaacgccacggaatccattatgacaaa
agtgggagatccaagggaacggcggaagtagttttctcacgacgactagatgctgttgcg
gctgtaaagaagtacaacaacgttcagcttgatggaaaaccaatgaagatagagatcgtt
ggaactaatatttccacgcctgctgttggtcctaccgctgctgtgaaccctttcgaaaat
tcaaatggggctccgagaaggcagcaaggtaggggtggtccaccatcacgtcaacgtggt
catggttttggaagagggcgtgggcggggaagaggccctagtgaaaaggtttctgctgaa
gatcttgatgccgacttggaaaagtatcatgctgagtctatgcagataaattag
DBGET
integrated database retrieval system