KEGG   Cucumis sativus (cucumber): 101217986
Entry
101217986         CDS       T02486                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
csv03015  mRNA surveillance pathway
csv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101217986
  09122 Translation
   03013 Nucleocytoplasmic transport
    101217986
   03015 mRNA surveillance pathway
    101217986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101217986
   03041 Spliceosome [BR:csv03041]
    101217986
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101217986
    TREX complex
     101217986
Spliceosome [BR:csv03041]
 Complex C
  Other components
   EJC/TREX
    101217986
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101217986
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_11 YHR127W_C RRM_3 RRM_10 PRR20 Btz EBNA2_Core
Other DBs
NCBI-GeneID: 101217986
NCBI-ProteinID: XP_004143092
UniProt: A0A0A0KBU2
LinkDB
Position
6
AA seq 237 aa
MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQ
HDMFADPSSGFLVQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDK
SGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFEN
SNGAPRRQQGRGGPPSRQRGHGFGRGRGRGRGPSEKVSAEDLDADLEKYHAESMQIN
NT seq 714 nt   +upstreamnt  +downstreamnt
atggccgctcctttggatatgagtcttgacgatatcataaagaacaacaagaaatccaga
tccggaaattctagaggtcgaggaagaggttctggacctggtcccgtccgtagattcccc
aatcgcgccgctaaccgcacaccttattccgctcccaaggcgccggagacgacgtggcaa
catgatatgttcgccgatccgagttctggatttctggtgcaaggtgggcgagcttctgct
attcagactgggactaagctttatatatctaatttggattacggtgtatctaacgaagat
attaaggaacttttttctgaagttggtgatatgaaacgccacggaatccattatgacaaa
agtgggagatccaagggaacggcggaagtagttttctcacgacgactagatgctgttgcg
gctgtaaagaagtacaacaacgttcagcttgatggaaaaccaatgaagatagagatcgtt
ggaactaatatttccacgcctgctgttggtcctaccgctgctgtgaaccctttcgaaaat
tcaaatggggctccgagaaggcagcaaggtaggggtggtccaccatcacgtcaacgtggt
catggttttggaagagggcgtgggcggggaagaggccctagtgaaaaggtttctgctgaa
gatcttgatgccgacttggaaaagtatcatgctgagtctatgcagataaattag

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