Cucumis sativus (cucumber): 101218075
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Entry
101218075 CDS
T02486
Name
(RefSeq) Fanconi anemia group J protein-like isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03440
Homologous recombination
csv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101218075
03460 Fanconi anemia pathway
101218075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101218075
Enzymes [BR:
csv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101218075
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101218075
FA (Fanconi anemia) pathway
Downstream FA components
101218075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
HBB
Baculo_VP91_N
Motif
Other DBs
NCBI-GeneID:
101218075
NCBI-ProteinID:
XP_031739564
LinkDB
All DBs
Position
4:complement(26204650..26212917)
Genome browser
AA seq
898 aa
AA seq
DB search
MSSNNPTRKVLCNTAKMVYAKGGRKPKSKPNRTYRLKKNVYRIGGVQVEFPFRPYGSQLE
FMDRVISTLDRAQREGHCHALLESPTGTGKSLSLLCSSLAWQKNFKIKNQDANFCHTRPA
PEAATNPLGFGGGFIPEVQPSMSTDTESSLPGPNNKIRKKKTAPTIYYSSRTHSQISQVI
REYRKTAYRVPMAVLASRKHLCTNPRVRGKDNLDEKCKLLLKDQDAGCSEFKNGNKVKCH
PTLQKGGRHEVHDIQDLVKTGEAVKGCSYYAARSMAYNAQLVFCPYSYIINPVIRRAIGV
DVKDAIVIFDEAHNIEDIARHGGSVDIEEDTLNKLQMELEQLCFINYLVYQPLYEMTQDL
KSWIDRRKTTLQEREFQHYVTCWTGNHAQRELQEANITQQCFPILLECATKATKAASYTV
SDDAHLSGLSVLTLEGLFSSLTYFFSRNGCHMSDYQLALQRYTKRDPEKACAKWTVTLSL
WCLNPAVVFRDIGDLSLSVILTSGTLSPLNSFSSELGVRFGTSLEAPHVIDVESQVWPAI
ISIGPGNYPLNASYKTADGYAFQDALGKSLEEIFFIAPGGCLVFFPSYKLMEKLRNRWSE
TGQWSRLNARKSLFVEPCGGAQEDFDSILKGYYDTIRLGDNFAVGKKVKPDESYVFGCEN
PKGAALLAVFRGKVSEGIDFSDDNARVVIIVGIPFPDINGIQVALKKKFNDKYKMSKNLL
SGNEWYCQQAFRALNQAAGRCIRHKFDYGAIVLLDERFQEERNRTYISKWLRKSIKQFDN
FEQSMEELKSFFSHIKERISNKTESELPKSVNEEHITSTCPSSCRRTKIEEFDKFNYRGQ
KGHQDVKNCTVDISQEEFVTDPKTKNHECNSVDRSSAISGNLTSPKDTSDEILLTEEV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgaataaccccactcgaaaagttctgtgtaatactgccaaaatggtctatgca
aaaggggggaggaagcctaaatccaagcccaaccgaacttatcggcttaagaagaatgtg
taccggattggtggcgtccaagtggaatttccattccgaccatacggttcgcagctggag
ttcatggacagagttatatccacccttgatcgagctcagcgagagggccattgccacgcg
ttgctggaatctccgactggaaccgggaagtcactttcacttctctgctctagtcttgct
tggcagaagaatttcaagataaagaatcaggatgctaatttctgtcacacgaggcctgct
ccagaggctgccacgaatcctctcggttttggcggtggatttattcccgaagtgcagccg
tcaatgtctacagatacagagtcatctcttccagggccaaacaacaaaattcggaagaaa
aaaacagccccgaccatttactactcctcgaggacacattcacagatatcacaggtgatc
cgtgagtataggaaaactgcctatcgagtgccaatggcagtgttggcgtcaaggaaacat
ctatgcacaaatcctcgtgtacgagggaaagataatttagatgaaaaatgcaaactactt
ttgaaggatcaagatgcaggatgcagtgaatttaaaaacggaaacaaggttaaatgtcat
ccaactcttcagaaaggaggacgtcatgaggttcatgacattcaagatttggtgaaaact
ggagaagctgtaaaaggttgttcatattatgcagctcgctctatggcatacaacgcacag
ctggtgttttgcccatatagctatattatcaatccagttatacgaagagcaattggtgta
gatgttaaggatgcgattgtgatctttgatgaagcccacaatatagaggatattgcacgt
catggtggtagtgtcgatattgaagaggatactttaaataaattgcagatggagttagag
caactatgttttattaattatttggtttaccagcctctgtatgaaatgacacaggatctc
aaaagttggattgaccgaaggaagaccacattgcaggagcgcgagtttcagcattatgtc
acctgttggactggcaatcatgctcaaagggagctccaagaagctaatataactcaacaa
tgcttccccattttactcgaatgtgcaacaaaggctactaaagcagcttcatatacggtg
tcagatgatgcacatttgagtggtctgtcagtgttaacactggaaggattattctcttct
ttgacatatttcttctcaagaaatggttgccacatgtctgactaccagcttgcattacaa
cgctacactaaaagagatcctgaaaaagcttgtgctaaatggacggttactttaagtttg
tggtgcttgaatccagctgttgtatttagagacattggtgatctttccttatcggttatt
ttgacatctgggaccctgtcaccgttgaattccttttcatctgaactaggagttcggttt
ggaacttcactggaagctcctcacgtgattgatgtggaatctcaggtgtggccagctatt
atatcaattggtccaggaaactatccgctgaatgcaagttataaaacagctgatggatat
gcattccaggatgctctaggaaaatcattagaggagatatttttcatcgctcctggtggc
tgtcttgtgttcttccccagttataagctgatggagaaactccgaaatcgttggtctgaa
actggtcaatggtctcgactgaatgcaaggaagtccctttttgttgagccatgtggagga
gctcaagaagattttgattccatattgaaaggttattatgatactatacgtcttggtgat
aactttgcagttgggaagaaggtcaaacccgatgaatcgtatgtttttggctgtgaaaat
cccaagggtgcagcactccttgcagtttttcgaggaaaggtttcagaaggaatagacttt
tctgatgataatgctagagtggttataatagttggtattccatttccagatataaatggt
attcaagttgcattgaagaaaaagttcaatgacaaatataaaatgtccaaaaacctttta
agtggaaatgagtggtattgtcaacaagcctttcgagctctaaatcaagctgcaggacga
tgtattcgacacaaatttgactatggtgccattgtgctattagatgagcgtttccaggaa
gagaggaacaggacttacatttcaaagtggctaagaaaatccattaaacaatttgataac
tttgaacagtctatggaggagctgaaatcctttttcagccacattaaggagcgcattagc
aacaagacagaaagtgagttgccaaaatctgtgaatgaggagcatattacttctacctgc
ccaagtagttgtagaagaacgaagatagaggaatttgacaagtttaattatcgtgggcag
aagggtcaccaagatgtgaaaaactgtacagttgatatttctcaagaagagtttgttact
gatcccaaaaccaaaaatcacgaatgtaacagtgtggacagaagctcagcaatcagtgga
aatttgactagcccaaaagatactagtgatgaaatccttctcacagaagaagtttaa
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