KEGG   Cucumis sativus (cucumber): 101218078
Entry
101218078         CDS       T02486                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csv04812]
    101218078
Cytoskeleton proteins [BR:csv04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     101218078
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th eIF2A Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IP5PC_F VPS8_N
Other DBs
NCBI-GeneID: 101218078
NCBI-ProteinID: XP_011653046
UniProt: A0A0A0LS94
LinkDB
Position
1:complement(7377137..7385326)
AA seq 938 aa
MAKRGYKLQEFAAHSGNVNCLSIGKKACRLFITGGDDYKVNLWAIGKPNSLMSLCGHTNP
VESVAFDSAEVLVLAGASSGAIKLWDLEEAKMVRTLSGHRSNCTAVEFHPFGEFFASGSR
DTNLKIWDIRKKGCIHTYKGHTQGISTIKFTPDGRWVVSGGFDSAVKVWDLTAGKLMHDF
KFHEGPIRSIDFHPLEFLLATGSADKTVKFWDLETFELIGSTRPEAAGVRAITFHPDGRT
LFSGLDESLKVYSWEPVICHDSVDMGWSTLGDLCIHAGKLLSCSSYRNSVGVWVADVALI
EPYGASSVSGQKEPKEQNLGSAFKNSLASKSTGSDLVTSNLQSLSPDYETKEIKNIYIDT
TGGKPVSPQKAESLSSPKIVFALDSKEISYNASKKQNLASRVEVKSSELSKDKPPVIPCD
SPEVKDPPSSVRESITFSKTRRGMLLRPAHIRKPSNSKIDLEKLSVSVDSSRKTDLERLP
VVDSVNVCNTTNDLNKAPVQNLKTSVVSEVIHVDPCGTNSDLISIEKFEKIPSVSAETTS
EQETCNKSVENSEGANSVKFVNGVAVVPGRTRTLVERFERREKTNDVQTTISPSNVLEPE
KTREQTNSLEVQVVTPQILETEKTHEQTNDFRVHEVTMPSHVSETETRCERTSNYEVQAV
AIPSHVSEPEKAREQTNNYEVRAMVIPRTPETKRMGINYEAKPRSNHEAKPRSNYEAKPR
SNYEAKTRNNYEAKSTLISSHVPETDKTDNLQKGEPQISGRDSTSANDRDVIEDLMQSHD
VFLSTLRSRLTKLQVVRHFWERNDMKGAINAMTKLPDHSVQADVISVLVDKMDVLTLDLF
SCLLPVLVGLLDSKIERHASLSMEILVKLVAVFGHVISSAVSAPPVVGVDLHAEQRVQCC
KQCFTQLQKVQKIIPSFVRRGGSLARSAQELNLVLQQC
NT seq 2817 nt   +upstreamnt  +downstreamnt
atggcgaagcgtggatataaactacaggaatttgcggcacactcaggaaatgtcaactgt
ctaagtattgggaagaaagcttgccgactgttcataactggtggagatgattataaagtc
aacctttgggcaattggaaaacctaattctttgatgagtctttgtggtcatactaatcca
gttgaatcagtagcttttgattcagcagaagttttggtgctcgccggagcttcatctggt
gcaataaagttgtgggatcttgaagaggctaaaatggttcgcactctatctggtcataga
tcaaactgcacggcagttgaatttcatccatttggcgagttctttgcatcaggttctaga
gacacaaatcttaaaatctgggatattagaaagaaaggttgcattcacacatacaagggg
cacacacaaggcattagtactatcaagttcacaccagatggtcgttgggtagtctctggt
ggttttgatagtgctgtgaaggtatgggatttaactgctggaaagttgatgcatgatttc
aagttccatgaaggacctattcgatccattgattttcatccacttgagtttctccttgcg
acagggtcagcagacaaaactgtgaaattctgggatttggaaacctttgaattgattgga
tctacaagacccgaggctgctggagtacgtgcaatcaccttccatccagatgggaggacc
ctgttttctggtctggatgaaagtctgaaggtatattcgtgggagcctgttatttgtcat
gattctgttgacatgggatggtcaacacttggtgacctttgcattcatgctgggaaactc
ttgagttgctcatcttatcgaaattctgttggagtttgggtagctgatgtagcgcttatt
gagccatatggagctagttcagtatctgggcaaaaggagccaaaagaacagaatctcggt
tctgccttcaagaacagtctagcttcgaaaagcactggaagtgatttggtgacttcaaat
ctgcaatctctgtctcctgattatgaaacaaaggagataaagaatatatacatagacaca
actggtggaaaacctgtttcaccacagaaggcagaatctttaagctcccccaaaattgtt
tttgcattggattcgaaggagattagctacaatgcaagcaaaaagcaaaatcttgcatcg
cgagtagaagtgaaatctagtgaattatcaaaagataaacccccagttataccttgtgat
agccctgaggttaaagacccaccaagctctgtgagggaatctatcacattttcgaagaca
aggcgtggaatgttactcaggccggctcatataagaaagccatccaatagtaaaatagac
cttgaaaaactctctgtgtcagttgattcaagtagaaaaactgatcttgagagactacca
gttgtagattctgtaaatgtctgtaataccaccaatgacttgaataaagctccagtacaa
aacttgaaaacaagtgttgtgtcagaagtaatacatgtagatccttgtggaacaaattct
gatctcattagtattgagaagttcgaaaaaatcccctctgtatcagctgagacaacttca
gaacaagaaacctgcaacaaatcagttgagaatagcgaaggggcaaactctgttaaattt
gtaaatggagttgcagttgttcctggaaggacacggactcttgttgagaggtttgaaagg
agagaaaaaacgaatgatgtacagacaacaatttcaccatctaatgtccttgaaccagag
aaaacgagagaacaaactaatagcttagaagtacaagtggttacacctcagatccttgaa
actgagaagacacatgaacaaactaatgactttagagtacatgaagtgactatgccttct
catgtctctgaaacagagacgagatgtgaacggactagtaactatgaagtacaggcagtg
gctattccttcccatgtctctgaacctgaaaaggcaagagaacaaactaacaactatgaa
gtacgagcaatggttattcctcgtacccctgaaactaagaggatgggtattaactatgaa
gcaaaaccaagaagtaaccatgaagcaaaaccaagaagtaactatgaagcaaaaccaaga
agtaactatgaagcaaaaacaagaaataactatgaagcaaaatcaactcttatatcttct
catgtccctgaaacagataaaaccgacaatttacagaaaggagaacctcaaatttctgga
agagattctacctctgcaaatgacagggatgtcattgaagatttgatgcaatctcatgat
gtattcttaagtaccctccgatcccgcttgacaaaattgcaggtggtacgacacttttgg
gagcggaacgacatgaaaggcgccattaatgccatgacaaagcttccggatcattcggtg
caagcagatgtgatcagcgttctcgttgacaagatggatgtcttgactctagatttattc
tcatgcttacttcctgtacttgtgggtttattggatagcaagatagaaaggcatgccagt
ttgtcaatggagattctagtgaagcttgtagcagtttttggtcatgttataagctcagca
gtatcagcacctccagtagtcggtgttgaccttcatgcggaacagagggtacaatgctgc
aagcaatgctttacccaactgcagaaggttcaaaaaattattccatcatttgtaaggaga
ggtggttcactagctagaagtgctcaggaattgaatctagttcttcaacaatgttaa

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