Entry |
|
Name |
(RefSeq) probable pectate lyase 8
|
KO |
|
Organism |
csv Cucumis sativus (cucumber)
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Pathway |
csv00040 | Pentose and glucuronate interconversions |
|
Brite |
KEGG Orthology (KO) [BR:csv00001]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101218188
Enzymes [BR:csv01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101218188
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
3:8895901..8901153
|
AA seq |
447 aa
MAMAESGKWIRLILLVVFMLFVGAIARAPKEIPEIENGGTEKLQSSSNSTMAVRLDEAKD
LGNEHAVDNPEEIAAMVDMSIRNATARRELGFFSCGTGNPIDDCWRCDPNWQQNRKRLAD
CGIGFGRNAIGGRDGRFYVVTDSGDDNPVNPKPGTLRHAVIQDEPLWIVFKRDMVIQLKQ
ELIMNSFKTIDARGTNVHIANGACLTIQFVTNVIVHGLNIHDCKPTGNAMVRSSPNHVGW
RTIADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLLGHS
DSYVRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQ
GNRYAAPTNPFAKEVTKRVETSESEWKGWNWRSEGDLLLNGAFFIPSGAGASSSYARASS
LGAKSSSMVGTITSNAGALSCRRGHAC |
NT seq |
1344 nt +upstreamnt +downstreamnt
atggcaatggcggaatctggtaaatggattcgtttgattcttctcgtggtgttcatgttg
ttcgtcggagcaattgctagagctcccaaagagattcctgaaattgagaatggaggaact
gagaagctgcagagctcaagcaactcaacgatggcggtgaggttggatgaggctaaggat
ctcggtaatgagcatgctgtggacaacccagaagagatcgctgctatggttgacatgagt
atccgcaatgctactgcgaggagggagctcggtttcttctcttgtggaaccggcaatcct
attgatgactgctggcgttgcgaccccaattggcaacagaatcgcaaacgtctcgcagat
tgtggcattggctttggccgaaacgccatcggaggccgtgacggtcgattttatgttgtc
actgactccggcgacgacaaccctgtcaacccaaagcctggtactttgcgacatgccgtc
atccaggacgaacctctctggattgtgttcaaaagagacatggtgattcagctgaaacaa
gagctgattatgaatagtttcaagacaattgatgctcgtgggaccaatgttcacattgct
aatggtgcttgcctcacaatccagtttgtgaccaatgttattgtccatggtctaaacatc
catgactgcaaacccactggaaacgccatggtaagaagctcacccaatcacgtggggtgg
agaacaatagctgatggtgatgccatttcaatttttggatcaagtcatatttggatcgat
cacaattcactctctaattgcgctgatggcctcgttgatgctgtcatgggatccactgca
attaccatctccaacaattacttcacccaccacaacgaggttatgttattaggacatagt
gattcttacgttagagataaactaatgcaagtgaccattgcttacaatcactttggtgaa
ggactcatccaaagaatgccaaggtgtagacacggatacttccatgtggtgaacaatgat
tatactcactgggagatgtacgccattggtggaagtgcaaatccaaccatcaatagtcag
ggtaacagatatgctgctccaaccaacccttttgcaaaagaggtaacaaagagagttgag
acatctgaaagtgagtggaaaggttggaattggagatcagaaggagaccttttgttgaac
ggagcctttttcattccatctggtgcgggggcctcatcaagttatgctagagcttcaagc
ttgggagctaaatcttcatccatggttggtactataacatccaatgccggtgcgctttcc
tgccgaagaggccacgcgtgctag |