Cucumis sativus (cucumber): 101218245
Help
Entry
101218245 CDS
T02486
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101218245
04121 Ubiquitin system [BR:
csv04121
]
101218245
Enzymes [BR:
csv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101218245
Membrane trafficking [BR:
csv04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101218245
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101218245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
A2L_zn_ribbon
zf-RING_UBOX
zf-ANAPC11
Rad50_zn_hook
DUF7129
zf-C3HC4_3
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-GeneID:
101218245
NCBI-ProteinID:
XP_004147682
UniProt:
A0A0A0KLW4
LinkDB
All DBs
Position
5:complement(4954635..4956896)
Genome browser
AA seq
383 aa
AA seq
DB search
MSSMAAASSYWCHRCSHFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA
AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG
GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN
YLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCRHELPSDNQNSL
DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT
NGGLPRRVSFASRGRGRERGRWGQMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP
HFNSEPRRRRTWSMEVNSGTISW
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgatggcggcggcgtcttcctactggtgtcaccgttgcagtcactttgttagg
gtttctaatcaggattcagttgtgtgccctgattgtaatagtggattcgttgaacagatc
gaacatccctcgaggttggtgaacgtggaagctgcgccgcggaggagatttccggctgcg
gcgatgtatatgatcggcaaccgctcgaattcggggcagaatttgggatctgggctgaga
agatctcggaggaatggaggggatcgctcgccttttaatcctgtgattgttcttcgtggg
ccgtctgatgggagtgaagctggagaaagtcgtcggtttgagctttattatgatgatggt
ggtggttctggcctgagacctctcccaccgagtatgtccgagtttttgttggggtccggg
tttgataggcttctggaacaactttctcagattgaaatgaacggtattgggcggtttgag
aatccgccggcgtcgaaggctgctattgaatcaatgcccactattcaaatctgtgaaaat
tatttggcaactgagtcacactgtgctgtttgtaaagaagcattcgaattgggaaccgaa
gcacgggagatgccctgtaagcatatttatcattgtgattgtattttaccgtggctttcc
attcgaaattcttgtccagtttgtcgtcacgaattaccatctgataatcagaactctctg
gatgctgctgaaagtggcgaaaatgggggatctgtgacctcgaatggggaggagaatgtt
ggcttaaccatttggaggttaccgggtggggggtttgcggtagggcggtttcatggtggc
aggagagggggggagagagagctcccggttgtttacactgaagtggatggcggttttact
aatggtggtcttcctagaagagtatcatttgcttctagaggcaggggtagggagagaggc
aggtggggccaaatgattcgcaatatgtttgcttgctttggcggatcaatgaggtcaatt
gcatctacttcaaactccacaagtgattctggtccttcaaggagtagtagaccacttccg
catttcaatagcgagccaaggcgacggcgtacatggtctatggaggttaacagcggaaca
atcagctggtga
DBGET
integrated database retrieval system
