Cucumis sativus (cucumber): 101218346
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Entry
101218346 CDS
T02486
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csv03000
]
101218346
03036 Chromosome and associated proteins [BR:
csv03036
]
101218346
Transcription factors [BR:
csv03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
101218346
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
101218346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
101218346
NCBI-ProteinID:
XP_011649017
LinkDB
All DBs
Position
2:complement(6544428..6606215)
Genome browser
AA seq
1484 aa
AA seq
DB search
MEEKHEDVDDVGSASGDSFIDDSEDDGPSTSGKDDQLHLEEPLTEQEIEDLVAEFLEVES
KAAEAQEALEKESLAKVEKEVREELALTLNGDDLETAIANEMAAFVEEWEVVLDELEIES
AHLLEQLDGAGIELPSLYKLIESQASNGCFTEAWKKRIHWVGSQVTGDLLASVSDAEKTL
QIERPVMRRHGKLLEEGASGYLQKKFSTHEIEGIGTEKLEVDWGSLNKVFSEGSKDSDTL
FGSKNWASVYLASTPQQAAEMGLKFPGVDEVEEIDDVDGSSCDPFVAAAIENEKELDLSE
EQKKNFRKVKEEDDAIFDRKLQIHLKQKRNQKRCKQVSQKDVSPRDEEQPVSLVDCLNPV
SDDKVDKCRMGLSDDENGDVKIKVDIPNGSDASSDIDMERSMEHTASVLPSASSNFVEPL
GSKRLNDMEEVITQTKKSRTNGVHNDENSPMKEHSALLNTICNTEQNDYDADSLPSTCPN
EKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVKEPDCSECYCGWCGHNADLVS
CKSCKTLFCTGCIRRNLGVECLLKAQASGWHCCCCRPSLLQSLTTQLEEALGSEELTGSS
SDSDSDNPNADINVTISSKRKRKKKIRRILDDAELGEDTKKKIAIEKERQERLKSLQVQF
SSNSKMMSSAGFCGNLSEGASVEVLGDASTGYIVNVVREKGEEAIRIPPSISSKLKTHQI
SGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSADLGLRTALI
VTPVNVLHNWRQEFFKWKPSELKPLRIFMLEDVPREKRAVLLAKWRAKGGVFLIGYSAFR
NLSLGKHVKDRQMAKEICHILQDGPDILVCDEAHMIKNTKADITQALKQVKCQRRIALTG
SPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLDDVKIMNQRSHILY
EQLKGFVQRMDMTVVKKDLPPKTVFVISVKLSPLQRKLYKRFLDVHGFNNGKDSSEQLRK
RSFFAGYQALAQIWNHPGILQLTKEDKYYVKREDAIENFLAGDSSSDENIDSNIGTGDKP
VNANGNHQDKFVSGFFVKDWSNGLLHANSYKEVDYGGKMVLLLEILTMCSELGDKALVFS
QSIPTLDLIEFYLSRLPRRGKRGKFWKKGKDWYRLDGRTESSERQKIVERFNEPLNKRVK
CTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRFLAHGTM
EEKIYKRQVTKEGLAARVVDRQQVYRTISREEMLHLFEFGDEENLEASTELDQGNGHTSH
QIMTGHQGNVLKQKGPLSHGSCSSDKLMETLLGKHHPRWVANYHEHETLLQENEEEKLSK
EEQDMAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRARNRFVSR
KCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagcacgaggacgtggatgatgttggaagcgcgtccggtgattcttttatt
gatgattctgaagacgatgggccatcgacttctgggaaggacgatcagttacatctcgag
gaaccattgactgagcaagagattgaggatttggtggctgagttcttagaagttgagagt
aaggctgcagaggctcaagaagcacttgaaaaggagtctcttgccaaagtggagaaagaa
gttcgagaagaactggcattgactcttaatggtgatgatttggaaacagccattgcaaat
gaaatggctgctttcgtagaggagtgggaggttgtgctcgatgagcttgagattgagagt
gctcatttgttggagcaacttgatggtgctggtattgagctgccaagtctctacaagcta
attgaaagtcaagcttctaatggttgctttactgaagcttggaaaaagaggatacactgg
gtagggtctcaggtaactggtgatcttcttgcatctgtatctgacgcagagaaaaccctc
caaattgaaaggcctgtaatgagacgacatggtaagctgttggaggagggagcaagtgga
tatctgcagaagaaattttccactcacgagattgagggaatcggtacagaaaaattggaa
gttgattggggctctcttaataaggttttttcagaaggctcaaaggacagtgacacgttg
tttggcagcaagaactgggcttctgtttacttggctagcactccgcaacaagctgcagaa
atgggactcaaatttcctggagttgatgaggtagaggagatagatgatgttgatggaagt
tcttgtgatccatttgttgcagctgccattgaaaatgaaaaagagttggatctttctgaa
gaacaaaagaaaaatttcagaaaggtcaaagaagaagatgatgccatttttgaccgaaaa
ctccaaatacatttgaaacaaaagcgaaatcagaaaagatgtaaacaggtctcccaaaaa
gatgtttccccaagagatgaagagcagcccgtatctttggttgactgtttgaaccctgtt
tcagatgataaagttgacaaatgtcggatggggttatctgatgatgagaatggagatgtt
aaaatcaaggttgacatacccaacggttctgatgcttcaagtgatattgacatggaaagg
tctatggagcatacagcttctgtgcttccttcggcttcatctaattttgtggaaccttta
ggttccaagcgtttaaatgatatggaagaagttatcactcaaactaaaaagagtcgaact
aatggtgtacataatgatgaaaattccccaatgaaggagcattctgctttgttgaacacc
atatgcaacacggaacaaaatgactatgatgctgattctcttccatcgacgtgtccaaac
gagaagatccattgtactgcttgtgatcaagtggttattaaagtgtatgcacatcctttc
ctgagagtaattgtttgtgcagattgcaaaagcatgatggatgacaagaagaatgtaaag
gaacctgattgctctgaatgctattgcggatggtgtggccacaatgctgatttagtaagt
tgtaaatcatgtaaaacactcttttgtactggttgcataaggcggaaccttggtgttgag
tgcttgctcaaggcccaggcttctgggtggcattgttgttgttgtcgcccaagtcttttg
caatccttgaccactcagttggaggaagccttaggatctgaagagttgacaggttctagc
tctgatagcgattcagacaacccaaatgcagatataaatgtaaccatcagctcaaagaga
aagcgtaagaaaaaaatacggcggatactcgatgacgctgaattaggagaagatactaaa
aagaaaattgccatagagaaggaacgccaagaacgtctaaaatcattacaagttcagttt
tcgtccaattctaaaatgatgagctctgctggcttttgcggaaatctatctgaaggtgcc
agtgtcgaagtccttggtgatgcctcaacgggatatatagtgaatgttgtgcgggagaaa
ggagaagaggccattagaattccgccaagcatttcatcaaagttgaaaacccatcagatt
tctggaataagatttatgtgggaaaatatcattcaatcaatacggaaagtgaagtctggg
gataaaggacttggatgcattcttgctcatacaatgggccttggtaaaacttttcaggtt
atagcattcttatacactgcaatgagaagtgcggacttgggtttacgaacagcacttatt
gttacccctgttaatgtgttgcataattggcggcaagaattcttcaagtggaagccttca
gaattaaagcctcttcgcattttcatgctagaagatgtaccaagggagaaaagggccgtg
ttgcttgccaagtggagagccaagggtggtgtctttttaattggttatagtgctttccga
aacttatcacttggtaaacatgtcaaggacagacagatggctaaagaaatatgccatatc
cttcaggatggaccagatattcttgtatgtgatgaggcccacatgattaagaataccaag
gctgatataacacaggcattgaaacaagtgaaatgccagaggaggattgcgttgactgga
tcaccactacagaacaatctcatggagtactattgtatggttgattttgtgagagaaggt
ttcctgggaagtagccatgaatttaggaatcgcttccagaaccccatagagaatgggcag
catactaattcaactctggatgatgttaaaataatgaaccagaggtctcatattctatat
gaacagttgaaagggtttgttcaaagaatggacatgaccgtggtgaagaaggacttgcca
cctaaaactgtctttgtgatatccgtaaaactctctcccttacagaggaagttatacaaa
agatttcttgacgtgcatggatttaataatggcaaggattctagtgaacagttaaggaaa
cggagcttttttgctgggtaccaagcactggcccagatctggaatcatcctggaatcctg
caattgaccaaagaagacaaatattatgtgaagcgtgaagatgctattgaaaattttctt
gcaggcgattcctccagtgatgaaaacatagattctaatattggaactggagataaacca
gtgaatgccaatgggaatcatcaggataaatttgttagtggtttttttgttaaggattgg
tcaaatggtctgcttcatgcaaatagttacaaggaggtagattacgggggaaaaatggtt
ttgctgctagagatcttaaccatgtgctctgaattgggcgataaggcattggtgttcagc
cagagcattcctacgcttgatctaattgaattctatctttcaagattgcccagacgagga
aagagaggaaaattttggaaaaagggtaaagattggtataggctagatggaagaactgag
agttccgaaagacagaagattgtcgaaaggtttaatgagcctctaaataagagggtgaaa
tgtaccttgatatcaactagagctggatcattgggcatcaatcttcattctgctaatcgt
gtcattatagtggatggctcttggaatccaacttatgatcttcaggctatttatcgagct
tggagatatggccaaacaaaacctgtgtttgcttaccgatttttggcgcatggaacaatg
gaagaaaaaatttataagcgtcaggtaacaaaggagggactggctgctagagttgttgat
cgccaacaggtatatcgaactatttctcgggaagaaatgttgcatctttttgaatttggt
gatgaagaaaatcttgaggcttccactgagttggaccaaggaaatgggcatacatcccac
cagattatgactgggcatcaaggaaacgtgctgaagcagaaagggcctctttcccatggc
agttgctcatccgacaagttaatggaaactttacttgggaaacaccatccaaggtgggtt
gccaattaccacgagcacgaaacgctactccaagagaatgaagaggagaaactatccaag
gaggagcaagatatggcatgggaagtgtacagaaaatcattagaatgggaggaagtgcag
aaagtttcaccaggggattttatatctgagcagaagttaaccacgtcgaataatgcccat
cctgcacctgagacaattgatctggcacaatcaagggccaggaaccgattcgtttcccgt
aaatgcacaaatctttctcatttgctaacacttagaagtcaggggacaaaggttggctgt
agtacagtttgtggggaatgtgcacaagagataagctgggaagatctcaacagagatgcc
aagttagggaagtga
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