KEGG   Cucumis sativus (cucumber): 101218371
Entry
101218371         CDS       T02486                                 
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    101218371
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csv03400]
    101218371
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     101218371
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WDR55 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_SCAP Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 RAWUL ANAPC4_WD40 Beta-prop_IP5PC_F WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR11_1st PAN2_N VWA_3_C
Other DBs
NCBI-GeneID: 101218371
NCBI-ProteinID: XP_004139215
UniProt: A0A0A0LJF0
LinkDB
Position
2:2346762..2360338
AA seq 757 aa
MHRVGSAGNTSNSSRPRKEKRLTYVLSDANDSKHSAGINCLAVPKSSIDGCDFLFTGSRD
GTLKRWSLAEDVASCSATFESHVDWVNDAVLVGNNRLVSCSSDGTVKTWNSLSDGGCTKT
LRQHSDYVTCLAAAEKNSNVVASGGLGGEVFIWDLEAAYAPSAKSNDATDDECSNGIIAS
GNSLPVTSLRTISSSNNISTHPNQSHGYVPIAAKGHKESVYALAMNDSGTLLVSGGTEKV
VRVWDPRTGSKTMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAVH
TDSVWALASTPSFSYVYSGGRDLSLYITDLSTRESLLLCTGEYPIQQLAIHDENIWVATT
DSSVHRWPAEGRNPQKVFERGGSFLAGNLSFSRARASLEGSTPVPVYKEPTFTISGAPAI
VQHEILNNRRHILTKDAAGSVKLWEVTRGIVIEDYGKVSYEEKKEELFEMVSIPAWFTVD
TRLGSLSVHLDTPQCFSAEMYSADLNITGKPEDDKVNLARETLKGLMAHWFAKRKQRFGS
QASANGDVLSAKDTSARSLSHSRLEADGNAENDSMVYPPFEFSTVSPPSIITEGSQGGPW
RRKITELDGTEDEKDFPWWCLDCVLNNRLPPRENTKCSFYLHPCEGSSIQILTQGKLSAP
RILRVHKVVNYVIEKMVLDKPLDNLNPDVPFGPGLSSTVGDVSFRSGLKPWQKLKPSIEI
LCNNQVLSPDMSLATVRNYIWKKPEDLVLNYRVVQGR
NT seq 2274 nt   +upstreamnt  +downstreamnt
atgcaccgagtgggtagtgcggggaatacatccaattcttctcgcccccgcaaggagaag
cggttgacatatgttttgagtgatgccaatgatagtaagcattctgctggtataaattgc
ttggctgtgccaaagtcttctatcgatggctgtgatttcctttttactgggagccgtgat
ggtacactgaagagatggtctctagctgaagatgtagcttcctgctcggccaccttcgag
tcccatgtggattgggttaatgatgcagtccttgtaggcaataataggcttgtttcttgt
tcttcagatggcactgtgaagacgtggaatagcttatctgatggaggttgcactaagact
ttgcgtcagcattctgactatgtgacttgtcttgctgcagcagaaaaaaatagcaatgtt
gttgcatctggaggtcttggtggggaggttttcatatgggatttggaggctgcatatgct
ccaagtgcaaagtcaaatgatgcaactgatgacgagtgttcaaatggtatcattgcttct
ggaaattcacttccagtcacaagtttacgcactatcagctctagtaacaacatttctaca
cacccaaatcagtctcacggttatgttccaattgctgcaaaaggccataaggaatcagtt
tatgcattagcaatgaacgacagtgggacacttctcgtctctggtggaactgagaaggtt
gttcgtgtttgggatcctagaactggttcaaagaccatgaagttaagaggacatacagat
aatattagggctctccttttggactcaactggcaggttctgcctatcaggatcttctgat
tccatgatcagactgtgggatcttggtcaacaacgatgtgtgcattcctatgccgtacat
actgattctgtttgggcactagcaagtacaccatcatttagttatgtttatagtggtggt
agagacctctctctgtatataacagacttgtccacgagagagagtcttttgctttgcaca
ggggaatatcctattcaacaactggcaatacatgatgagaatatatgggttgcaactaca
gattcttcagtccatagatggcctgctgaggggcgcaaccctcagaaggttttcgaaagg
ggtggttcattcttagctggaaatctgtcattttctagggcaagggcttccttagaagga
tctactcctgttcctgtatataaagaaccaaccttcaccatttctggagctccagcaatc
gtgcagcatgaaattttaaataataggaggcatatcctgacaaaggatgctgcaggttca
gtgaagctatgggaggttaccaggggcattgtaattgaggattatggaaaggtctcatat
gaagagaaaaaggaagagttattcgagatggtgagcattcctgcttggtttaccgtggat
accaggcttgggagtttgtcagttcatcttgacaccccccaatgcttttctgcagagatg
tattcagcagaccttaatattacaggaaagccggaagatgataaggttaatctagctcga
gaaacccttaaaggacttatggctcattggtttgccaaaagaaaacaaagatttgggtca
caagcttcagctaatggagatgttctttctgcgaaggatactagtgcaagaagtctttcc
cattcaaggcttgaagctgatggcaatgctgaaaatgattccatggtctatcctccattt
gaattttcaacagtttctcctccttcaatcattacggaaggttcacaaggtggtccttgg
agaaggaagattactgaattggatggtacagaagatgagaaagactttccatggtggtgt
ttggattgcgtgttgaataaccgtctacctccaagagaaaataccaagtgtagcttttat
ctacatccttgcgaaggttcatccattcagatcctaacacaaggaaaacttagcgctcct
cgtattttgagagtgcataaggttgtaaattatgtcatagagaagatggttcttgacaag
ccattggataatttaaatccagacgttccttttggtcctgggctctcttcgacagttgga
gacgtatcatttcgatctggtttaaagccttggcaaaagcttaagccttctatagaaatc
ttatgcaataatcaggtcttgtctcctgatatgagtttagccacagttaggaattacatt
tggaagaagccagaggatttagttctcaattacagagtggttcaaggcaggtga

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