KEGG T02486: 101218446

Cucumis sativus (cucumber): 101218446

Entry

101218446         CDS       T02486

Name

(RefSeq) glycine-rich RNA-binding protein blt801

K12741

heterogeneous nuclear ribonucleoprotein A1/A3

Organism

csv Cucumis sativus (cucumber)

Pathway

csv03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:csv00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101218446
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101218446
   03041 Spliceosome [BR:csv03041]
    101218446
Messenger RNA biogenesis [BR:csv03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101218446
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101218446
Spliceosome [BR:csv03041]
Common components
  Common spliceosomal components
   hnRNP proteins
    101218446

SSDB

Motif

Pfam:

RRM_1 RRM_7

Other DBs

NCBI-GeneID:

101218446

NCBI-ProteinID:

XP_011648448

UniProt:

A0A0A0LPA9

LinkDB

Position

1:complement(1841520..1844316)

AA seq 287 aa
MAFLSKFGNILRQGANKRIGLDLHRSSLSLSQAVRWMSSMESSKVFVGGISFSTDDQSLR
EAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYAN
DRARGGGGGYGGGGYGGGGYGGGGGYGGGGGYGGGGGYGAGGGGAYGGGGYSGGGAGGYG
GYSGMGGGNYGGGSGGNFSNDYASDNRGSVGGFGGNDAGYNAASNFATGNTFGSESNAGF
GSSDYFAKSEGEQFGSNETNTMKASGEDHFEENARDEDDSNDFAKRA

NT seq 864 nt +upstreamnt +downstreamnt
atggcttttttaagtaagtttggaaatatactgaggcagggtgcaaataagaggattgga
ttagatttgcaccgttccagtttgtctctctctcaagctgtacgatggatgtcttccatg
gaaagttcaaaagtttttgtcggaggtatttcgttcagcactgatgatcaaagtctcagg
gaagcctttaccaaatatggggaagtaatcgaagctagggtcattgtagaccgtgaaact
ggaagatccagaggatttggatttgtgacttacacctctagtgaggaggcctctagtgcc
atccaggcattggatggacaggaccttcatggtcgccgagtgagagtgaattatgctaat
gatagagctcgtggtggtggcggtggttatggcggtggcggctatggtggcggcggttat
ggtggtggtggaggttatggtggtggtggaggttatggtggtggtgggggttatggagct
ggtggcgggggggcttatggaggtggtggctatagtggtggtggtgctggaggttatggt
ggatattctggaatgggtgggggcaattatggcggaggaagtggaggaaattttagtaat
gattatgccagtgacaaccgtggaagtgttggtggctttggtggtaatgatgctggctac
aacgctgctagcaattttgctactggaaacacattcggtagtgaaagtaatgcaggtttt
ggtagcagtgactattttgccaagagcgagggggaacaatttggcagcaatgaaacaaac
accatgaaggcatctggagaggatcattttgaagaaaatgctagggatgaagacgattca
aacgactttgctaaaagagcctga

DBGET integrated database retrieval system