Cucumis sativus (cucumber): 101218613
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Entry
101218613 CDS
T02486
Name
(RefSeq) structural maintenance of chromosomes protein 3 isoform X1
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csv03036
]
101218613
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csv00535
]
101218613
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101218613
Meiosis-specific proteins
Cohesin complex and associated proteins
101218613
Proteoglycans [BR:
csv00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101218613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
Myosin_tail_1
ATG14
DUF7491
HAP1_N
ATG16
Motif
Other DBs
NCBI-GeneID:
101218613
NCBI-ProteinID:
XP_011653545
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All DBs
Position
4:13541750..13557143
Genome browser
AA seq
1203 aa
AA seq
DB search
MHIKQVIIEGFKSYREQVATEPFSPKINCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVLTAFVEIVFDNTDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMH
ETSNKRKQIIQVVQYLDERLRELDEEKEELRKYQQLDKQRKALEFTIYDKEVHDTRQKLL
EVDEARAKVSETSTKMYNSVLDAHERSKDFDKKLKELTKEIQGLVKEKEAVEKRRTEVIK
RRTELELDVKDLEEKISGNTRAKEDAGRQLQMLQKEIQDSSVELDKISPIYDNQIVEEKE
ISKGIMEREKQLSILYQKQGRATQFASKAARDRWLQKEIDEYERVLSSNIGQEQKLQDEI
GKLDAELVERDAFIERRKMDITTLQSHITESSHGFNAFRAQRDKLQDERKSLWSKENELV
AEIDRLKAEVEKAEKSLDHATPGDVRRGLNSVRRICKEYRISGVHGPIIELLDCDDKFFT
AVEVTAGNSLFHVVVENDEISTQIIRHLNSSKGGRVTFIPLNRVKAPQISYPQSSDVIPL
LKKLKFSPNFSPAFSQVFARTVICRDLDVATRVARTDGLDCITLEGDQVSKKGGMTGGFY
DHRRSKLKFMNMIMQNTKAINIKEDDLAKVRSALQEIDRKITELVSEQQKLDAKLGHDKS
ELEQLKQDIANAQKQKQSISKARLNKEKSLADVRNQIDQLRGNMAMKQAEMGTDLIDHLT
PEEKHLLSRLNPEISELKEKLIACKTERIETETRKAELETNLTTNLKRRKQELEAIISSA
EADSLLGEAELKRQELKDAKLLVEEATQQLKRVSETMDDKSKEIKKIKDEKNKLKTLEDN
YERTLQDEAKELEQLLSKRSVLLAKEEEHTKKITDLGLLPSDAFETYKRRNIKELYKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIQELIGVLDQRKDESIE
RTFKGVAKHFREVFSELVQGGHGYLVMMKKKDGDQHDDDPDEAGPPEADTGGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADMANTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVTKEDALDFIEHDQS
HNN
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcacataaagcaggttattattgaagggtttaagagttatagagaacaagttgccacc
gagcctttcagtccaaaaataaactgtgttgttggtgcgaatggatctggcaagactaac
tttttccatgctatacggtttgtactgagcgaccttttccaaaatttgaggagtgaagat
aggcatgctttgctccacgaaggtgcagggcaccaagttttaactgcttttgtggaaatc
gtgtttgataatacggataaccgtataccagtagacaaggaagaggtgcgcttgcgtcga
acgattgggctgaaaaaggatgagtatttcttagacgggaaacatatcacgaaaacagaa
gttatgaatttattggaaagtgctggattttctcgctcaaatccttactatgttgtgcaa
caaggaaagatagcatcattgacattgatgaaggactctgagcgattagatttactcaag
gaaattggtggtactcgagtttatgaggagagaaggcgggaaagtttgaaaataatgcat
gaaaccagcaataaaagaaagcagatcattcaagttgttcagtatcttgatgagagattg
agagaacttgatgaagaaaaagaagaacttagaaaatatcagcagttggataagcagcga
aaagccctagagttcactatttatgacaaagaagttcatgatactcgtcagaaactgttg
gaggtagatgaagcacgagccaaggtttctgaaacgtcaactaaaatgtacaatagtgtt
ctagatgctcatgaaagatccaaggacttcgacaaaaaattgaaagagttgaccaaggaa
attcaaggtttagttaaagaaaaagaggcagtggagaagaggcgaacagaagttataaaa
aggcgcaccgagcttgaacttgatgtcaaagatcttgaagagaagatctctggaaatacg
agggctaaggaggatgcagggaggcagcttcagatgctacaaaaagaaattcaagattct
tctgttgagctcgacaaaataagtccaatttatgacaatcaaatcgtagaggagaaggaa
atatcgaaaggaataatggagcgggaaaaacagctcagtattctttatcaaaaacaaggt
cgtgccacccaatttgcaagtaaagctgctcgtgacaggtggcttcagaaggagattgat
gaatacgaacgagtgttatcttcaaatatagggcaggaacagaagcttcaggatgaaatt
ggtaagcttgatgctgagttagttgagagagatgcctttattgagaggcgcaaaatggac
attacaactttacagtcccacataactgagtcgtcccatgggtttaatgccttcagggca
cagagagacaagctacaggatgagcggaagtcgctgtggagcaaggaaaatgaacttgtt
gctgaaattgataggttgaaagctgaagttgagaaggcagaaaaaagtcttgatcatgct
acacctggtgatgtaagaaggggactcaattctgtgcggaggatttgtaaagagtacaga
atttctggggtgcatggtccaataattgagttgctggattgtgacgataagttctttacc
gctgttgaagttacggctggaaacagcttatttcatgtggtggttgaaaatgatgaaata
tcaacccagatcatacgacatcttaattcatcaaaaggcggaagggttacttttatacca
ctcaacagggtgaaagctccgcaaattagttatccacagagttctgatgtgataccgttg
ttgaagaaattaaaattctctcccaatttttcaccagctttttctcaggtgtttgctaga
acagtgatttgtcgtgatttagacgtggctacaagagttgctcgtacggatggtttggac
tgtataactttggagggtgaccaagttagcaaaaaaggtggtatgacagggggattttat
gatcaccgacgttcaaaattgaagtttatgaatatgattatgcaaaataccaaagccatt
aacataaaggaagatgacctggcaaaagttagatcggcacttcaagagatagacagaaaa
attactgaacttgtttcagagcagcagaaacttgatgccaagctgggtcatgataaatca
gaattggaacagcttaagcaggacattgctaatgctcagaagcagaaacaatcaatttcc
aaggctcgtttgaataaggaaaaatcacttgctgatgttcggaatcagattgaccagctt
aggggtaatatggccatgaaacaagctgaaatgggcacagatcttattgaccatttgaca
ccagaggaaaaacatcttctatcacgactgaaccctgaaatatcagagctgaaagagaag
cttattgcatgcaagacagaacgtattgagactgaaacgaggaaagctgagcttgaaaca
aatttaacaactaacctcaagcggcggaaacaagagttagaagctataatatcatctgca
gaagcagactctttactgggagaagcagaattaaagagacaggaacttaaagatgccaaa
ttattagtcgaggaagcaactcaacagctcaaaagagtttctgaaactatggacgacaaa
tctaaggaaattaaaaagatcaaagatgaaaagaataaactaaagactttagaggacaac
tacgagaggacacttcaagacgaagctaaagaattggagcaattattaagcaaaagaagt
gtgcttcttgccaaagaagaagagcatacaaagaaaattacggatctggggctactgcca
tccgatgcatttgaaacgtataagaggagaaacatcaaagaactatataaaatgttgcat
agatgcaacgaacaactgcagcaattcagccatgttaataagaaagcattggatcagtat
gtgaatttcacagaacagagggaagagcttcagaaaaggcaagctgaattggatgcgggt
gatgagaaaattcaagagctcataggagtattagatcagaggaaagacgaatcaattgaa
cgcacattcaaaggagttgcaaagcactttcgagaagttttctcagagcttgttcaaggt
ggccatggatatctagtaatgatgaagaaaaaggacggggatcagcatgatgatgatcct
gatgaagctggacctccagaagcagatactggaggcagggttgagaaatacattggagtg
aaagtgaaggtctcttttactgggcaaggagagacacagtctatgaagcagttgtctggg
ggacaaaaaactgttgttgctctaactcttatctttgccatacaacgatgtgatcctgct
ccattttacctatttgatgagatagatgcagcattggatcctcaatatagaactgcagtc
ggaaatatgattcgtcggctagcagacatggcaaatactcaatttataacaactacattt
aggccagagcttgtgaaggttgccgacaagatatatggtgtaacccataaaaatagggtg
agccgtgtcaatgttgtcaccaaggaagatgctctagactttattgagcatgaccaaagt
cacaataactaa
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