Cucumis sativus (cucumber): 101218693
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Entry
101218693 CDS
T02486
Name
(RefSeq) branchpoint-bridging protein isoform X1
KO
K13095
splicing factor 1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101218693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csv03041
]
101218693
Spliceosome [BR:
csv03041
]
Complex A
Other components
Complex A specific factors
101218693
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
101218693
NCBI-ProteinID:
XP_004142248
LinkDB
All DBs
Position
4:13666861..13672794
Genome browser
AA seq
800 aa
AA seq
DB search
MSAEVEKTSHIESKNVKMSGATISSAAPVGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
NKKLGGNESSANGENDKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIMELLKSGTLE
VPKTQDSTLECENVEDNSPGSQANNKTSYNELLELEKREVIGEILKLNPSYKAPPDYRPL
LKEDRLPLPVKEYPGFNFIGLIYGPSGENQKRLEKETGAKIRICGVKAGTGEKDEIKPTD
VHGIQNTYEELYVYMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSQ
ADGTTVSDMGQNPMPNQGVMQQGQFYGPPSVPGQFHYPSTWPSHNLTPAPGFISPQNPPS
SIINNPIHLSTPSSNVPNVPSLFAHPPAPVSFNPAFRGPPVPPPRQQLHAQDVQQPFMAQ
TSHVGQPRLHALPHQRLPSLVPSNVSKPNFTSSGPLPSGLLPNMAGSSLPQLVPSSFPPG
SRPDHPLAPNIVGSSVSMGANNMGQMAPSLPPPFGPRAAPPQGLNISGAAPADTAAANVD
GYASFPSGPSTPQATGINVNHHNTAPIPSHQMGHRPPFSVPSALLPSPAHNPPGNFIGGS
ASNPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQNTPTGPTLQQPASGAPSFHPSAPNF
LRVANQPFPGPQAGSQIGTHQIQDIASNPIGIQVSTRIPAFLNPGPRTQLHQRNFGPGFQ
MPNLPGNFPHRPGTSIQFEQDFHMRPRQPELRFTPPQYSSNLTFVSGKLLPPSSGGQQVY
DPFSPTSVSGPQHQGSNPLR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagaggttgaaaagacatctcatattgaatctaaaaatgtgaagatgtctgga
gcaactatttcttctgctgcacctgtgggaagccaaaaggtttccatgtttgcagcaaag
actgggtttgttataccaaaaaacaaactttcagggtctttggttccaatctttcgggtg
aacaaaaagttgggagggaatgaatcatcagctaatggagaaaatgataaacagacccaa
aggaatacaaagtggggtcctgatttaacacaagatactgcagttagaaaggggcggctc
atagcttatcagactcgattggaacaaatcatggaacttcttaagtctggaaccttggag
gttccaaagacacaagattcaacattagaatgtgagaatgtagaggataattcccctgga
tcccaagcaaataataagacgtcgtacaatgaacttttggaacttgaaaaacgtgaagtt
attggtgaaatactaaaactaaatccaagttataaggcccctcctgattataggccattg
ttgaaagaggacaggttacctctcccggttaaagaatatcctggtttcaactttattggc
ttaatatatggccccagtggtgaaaatcaaaagcgattagaaaaggaaactggagccaaa
atacgaatttgtggtgttaaagctgggactggtgaaaaggatgaaattaaaccaactgat
gtacacggaattcagaatacttatgaagagctgtatgtttacatgtcagctgatacattt
gataagatcgatgctgcaatttctgttatagaactcctaatcacctcaatctcgggaaat
ctggccactggttccacattgtctgatttggtttctacggaggaaagttcttccagccaa
gctgacggtactacagtatcagatatggggcagaatcctatgccgaaccagggggttatg
caacaaggacaattttacgggccaccttcagtgccagggcagtttcattaccctagtacg
tggccttctcacaatttaacgccagctcctggatttatttccccacaaaatcctccgtca
tcaattataaacaatccaatccatttatcaacacccagttcaaacgtccctaatgtaccg
tcattatttgcgcatccacccgccccagtttctttcaatccagctttccgaggccctcct
gttcctcctcctagacaacagttacatgcacaagacgtacagcaacctttcatggctcaa
accagtcatgttggccaacccaggcttcatgctttgccacatcaacggctgccctcattg
gttccatctaatgtctcaaaaccaaatttcactagtagtggtccattaccttcaggacta
ctcccaaatatggcaggatcatctttgcctcaacttgttcccagtagctttcctccagga
tcacggcctgatcacccattggcacctaacatagttggcagttcagtatctatgggtgca
aataacatggggcagatggctccatcacttcccccgccgtttgggcctcgagcagctcca
cctcagggtcttaatatttctggcgcagcacctgcagatacagcagcagccaatgtggat
ggatatgcatcttttccttctggaccttccactccccaagcaacaggtataaatgtgaat
caccataatacagctccaattccgtctcaccagatgggacatcgcccgccattttcggtg
ccttcagcactgttaccctcacctgcacataatcctcctggtaacttcattggtggatct
gcttcaaaccctccaacaccacctaccaatacaagtaattttacattccaaccacgtggc
ccacaaaatccatctcctcaaacaattttgaatttaaacattcaaaacacaccaacggga
cctacattgcaacagcctgcatccggggcaccatctttccatccatcggccccaaatttt
ctgagagttgccaatcaaccctttcccggaccccaagctggcagccagataggtactcat
caaattcaagatatagcttctaatcctattggcattcaggtctcaactagaattcctgct
tttctcaatccaggtcctcgaacacaactgcatcaaagaaactttggtccaggattccaa
atgccaaacttgccagggaattttcctcacagaccaggaacctccatacaatttgaacaa
gacttccacatgcgaccacgtcaacctgaactccgctttacacccccacagtacagtagc
aatctgacgtttgtttctggtaagctgctaccacccagttccggaggacagcaagtttat
gatccattctcgcctacatccgtatctggccctcaacatcaagggagcaatccgctaaga
tga
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