Cucumis sativus (cucumber): 101218707
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Entry
101218707 CDS
T02486
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101218707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101218707
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101218707
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
101218707
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
101218707
NCBI-ProteinID:
XP_031740749
LinkDB
All DBs
Position
4:complement(22318544..22322642)
Genome browser
AA seq
327 aa
AA seq
DB search
MKGLQLSLNHTQKIRLERAQERLKSLSSKGNSDASVVVADTIPLNYEDGVLKGHGTLDLN
GEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAVLM
LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDGLHLQARSQKYGKLERGQ
LLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPEQKG
SKFEGTFGNQVQEVYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSISLNIDV
HEMLGSEFCVLTAEKEVERRSSSKKRG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtttacaactttccttgaatcatacccagaagattcgtcttgaaagagcccaa
gaaaggcttaaatctctctcttcgaagggcaattctgatgcttctgttgtagttgctgat
actattcctctcaattacgaggatggtgtcctcaagggacatgggacccttgacttgaat
ggagaagtagttgcctctatttgtggagtggttgagcgagtcaataagctcatctatgta
cgtgccttgcgtgccagatataaaccggaggttggtgatatcgtagtgggacgtgttaca
gaggttgcaccaaaacgttggagattggatataaattattgccaagatgcagttttgatg
ctttcttcgatgaacttgcctgatggtattcagagaaggcgaactgccgttgatgaactc
aacatgcggagcatttttgaagaaaatgatgtcatttgtgctgaagtacgtggtcttcag
catgatgggctacaccttcaagcaagaagccagaagtatggcaagcttgaacgtggtcag
ctgctcacagtttctccatatctaataaagagacgcaaacaacacttccatcatttggag
caatacggtattgacctaatacttggatgcaatggttttatctggattggggagcatgtt
gatcccaaagtggtggatacgatgatagaggatcaagttgataaacctgaacaaaagggt
tcgaaatttgaaggaacttttggcaaccaagtgcaagaagtatatactccattagagaca
cgacagaatatctgcagaactgcaaatgcgattcgagtattgtctaccttaggtttcata
atgacagtagaagtcatcatggagatagttaatctaagtatttctctaaacattgatgtg
cacgaaatgcttggctcagagttctgtgttctcacggcagaaaaagaggtcgaacgacgt
tcttcgagtaagaagagggggtaa
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integrated database retrieval system
