KEGG   Cucumis sativus (cucumber): 101218722
Entry
101218722         CDS       T02486                                 
Name
(RefSeq) THO complex subunit 7A
  KO
K13176  THO complex subunit 7
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03013  Nucleocytoplasmic transport
csv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101218722
  09122 Translation
   03013 Nucleocytoplasmic transport
    101218722
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101218722
   03041 Spliceosome [BR:csv03041]
    101218722
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101218722
Spliceosome [BR:csv03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101218722
SSDB
Motif
Pfam: THOC7 APG6_N DUF1818 DUF4094
Other DBs
NCBI-GeneID: 101218722
NCBI-ProteinID: XP_011650079
UniProt: A0A0A0LRG7
LinkDB
Position
2:24562103..24567509
AA seq 241 aa
MSVRARKVSTRGEAVAANYAFGPLEDDVIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
IEKDGSNNDDCEKLSRAFLQELSTFEIPLLKSKAVVDANIREKESFHEFKDEINKQILLA
QDDIEDLKKQLEESKIERQHKEECEAIRKLIAAQPPRSVTQKTIVDLEKEIAALDSENTA
SSRMLELRKKQFALLLHVVDELQNTIEDEQKSLIEETRITAEENKIGVDDASGSLEAMAV
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atgtctgtgagagcgaggaaagtctccactcgaggggaagcagtggcagcaaattatgcc
tttgggcctctagaagatgatgttattattaaacacaggcttctcacacggacaaccaca
acaaggggggaacctccattgaagaagcttcagaagaagtttacttcctttgttcttgag
attgaaaaggatgggagtaacaatgatgactgtgagaagctttccagagcttttttacaa
gagttatccacgtttgaaattcctttgctgaagagtaaagcagttgttgatgctaatatt
agggaaaaggagagtttccatgagtttaaggatgagataaacaaacagattttgttagct
caggatgatattgaagatcttaagaaacagcttgaagaaagcaaaattgagaggcaacac
aaggaggagtgtgaggcaattagaaaacttatagcagcacaaccacctaggtctgtgaca
caaaagactattgtggatttggagaaagagattgctgcacttgattcagagaacacagct
agttcaaggatgctggagcttcgtaagaagcaatttgcgcttttgttgcacgtggtggat
gagttgcaaaataccatagaggatgaacagaagagtttaattgaggaaacgagaatcaca
gctgaggagaataaaattggtgtggacgatgctagcggaagcctggaagccatggctgtc
gactga

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