Cucumis sativus (cucumber): 101218837
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Entry
101218837 CDS
T02486
Name
(RefSeq) actin-interacting protein 1-2
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csv04990
]
101218837
Domain-containing proteins not elsewhere classified [BR:
csv04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
101218837
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GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_DCAF12
Gmad1
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
101218837
NCBI-ProteinID:
XP_004137336
UniProt:
A0A0A0LST9
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Position
1:complement(2640307..2646175)
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AA seq
611 aa
AA seq
DB search
MATPELSETYACVPSTERGRGILISGHPKTNSVLYTNGRSVMILNLDNPLEVSVYAEHGY
PATVARYSPNGEWIASADVSGTVRIWGTHIGFVLKKEFKVLSGRIDDLQWSPDGMRIVAC
GEGKGKSFVRAFMWDSGTNVGEFDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYEGPPF
RFKLSLRDHSNFVNCLRFSPDGSKFITVSSDKKGIIYDAKTGDKMGELSSDDGHKGSIYA
VSWSSDGKRVLTVSADKTAKVWEISDDGNGKLEKTLTSPGTGGVDDMLVGCLWQNQHIVT
VSLGGTISLFSASDLDKSPVILSGHMKNVTSLVVLKSDPKVILSTSYDGVIIKWIQGIGY
SGKLQRRENSQIKCFAALEDELVTSGFDNKVWRVSIKDGQCGEAEAIDVGSQPKDLTLAA
VSPELALVSIDSGVVLLRGSSIVSTINLGFTVTASVLAPDGSEAIIGGQDGKLHIYSING
DSLTEEVTLEKHRGAISVIRYSPDLSMFASGDLNREAVVWDRASREVKLKNMLYHTARIN
CLAWSPDNTKVATGSLDTCVIIYEIDKPASNRLTVKGAHLGGVYGLAFTDDFSVVSSGED
ACVRVWKLVPQ
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggccacgccggagctctctgaaacttatgcttgtgtgccatccaccgagcgaggccga
ggaattttgatctccggtcaccctaaaaccaactccgttctttataccaatggccgatct
gtcatgatccttaatctcgacaaccctctcgaggtctctgtctatgccgagcacggttat
ccggctacggttgccaggtactcgcccaatggtgagtggatcgcgtctgctgacgtgtct
gggactgtgaggatttggggcactcatattggtttcgtgctcaagaaggagtttaaggtt
ttgtctgggcggatcgatgatttgcagtggtctcctgatggaatgaggattgtggcttgt
ggtgaagggaaggggaaatcgttcgtgcgtgcttttatgtgggattctggtacgaatgtt
ggcgagtttgatggtcattctaggcgggttttaagttgtgcatttaaaccaacaagaccc
tttcgcattgccacctgcggagaggatttcctagtgaatttttatgaaggaccaccattt
agatttaagctatctctcagggaccattcaaattttgtcaactgtctaaggttctctcca
gatggcagcaagtttattactgtaagctccgacaagaagggaataatatatgatgcgaag
actggggataagatgggagaactctcttccgatgatgggcataaaggcagtatttatgct
gtcagctggagttcggatggaaagcgggtgctgactgtctctgccgacaagacagcaaaa
gtatgggagatatctgatgatggtaatgggaagttagagaaaaccttgacttctcctggc
acaggtggagttgatgatatgctggttgggtgtttatggcagaatcaacatattgtcaca
gtttctcttggtggaactattagtttgttttcagctagtgatcttgataagtcccctgtc
atcttatctggacatatgaagaatgtcacttcattagttgttctaaaaagtgaccctaaa
gttatattatccactagctacgatggggtgattattaaatggattcaaggcattggatac
agtggcaagttgcaaagaagagaaaattctcaaatcaaatgttttgctgctcttgaagat
gaacttgttacttccggttttgacaacaaggtatggagagtttctatcaaggatggtcag
tgtggggaggcagaggctattgatgttggaagtcaaccaaaggacttgacacttgctgct
gtttctcctgaacttgctttagtttcaattgattcgggagttgtcttactgcgtggctca
agcatagtgtcaaccatcaaccttggttttaccgtgacagcatctgtacttgcacctgat
ggaagtgaggctatcataggtggacaagatggtaagttacatatttattccatcaatggc
gactcgctcactgaagaagtaactcttgagaaacacagaggagctattagtgtgatacgc
tactccccagatctttcaatgtttgcatcaggagatctcaaccgagaagctgtcgtctgg
gatcgtgcatcccgagaggttaaacttaagaatatgttgtatcatactgctcggataaat
tgcctcgcttggtctcctgataacactaaggttgcgactggatcattagatacatgtgtc
atcatatatgaaattgacaagcccgcatccaaccgtctaacagtaaagggagctcatttg
ggtggggtgtacggactggccttcaccgacgactttagtgtcgtgagctccggtgaggat
gcttgtgttcgtgtttggaagttggttcctcagtga
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