| Entry |
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| Name |
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X1
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| KO |
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| Organism |
csv Cucumis sativus (cucumber)
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| Brite |
KEGG Orthology (KO) [BR:csv00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:csv04121]
101218841
Enzymes [BR:csv01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101218841
Ubiquitin system [BR:csv04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101218841
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
6:complement(594186..599216)
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| AA seq |
561 aa
MDNGCGFAKTICSICYEDLKPIIEDLQSISICGHVFHELCLQQWFEYCSNGKKKYSCPVC
KQTCVGKDVARLYFQSVGDANDSMLAKKPADWIEKDPELLRSEVKRLEMRVSVLNSTLET
QGKDIKELHEELQLCQDELKKEVGLRNDAMKQKTSMSQLLHLKSEELENTTVECKRLHER
SMALAKELAAFKLISEVDLDEEEVLKLSSLGSGADNKDTIDILRKSLVLRNRSYKELMAK
CNLLGRGEARSCKKLEKANEKINKLKVRVQELEKAIEEKDNEVLRGLKDAKKLGVQGSVC
CKCNMVSAKNKSAAATDTLDSTASQINEPLSSRKKKIYDFPSDTRTSHLTTVDIAENTCS
SMNKKTSECSQVENAKDSTMESQISEEGNRVSYHPQLTSCNLVRKKASERTTNSVNPMPS
TTVSNIVRTAVPGDACMPLLVEDSAEPEAVLINIRRESSSHISLNKLGGMSFSGGLLGPS
GSNMYLGKWCKRGQTNDSSAMQGSRSGELIAVGADGRGGQIKVLRSQNESSLSDATSAGT
KRFKNGVKNVNMRIENFFSKC |
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| NT seq |
1686 nt +upstreamnt +downstreamnt
atggacaatggttgcggttttgccaaaaccatttgctcaatttgctacgaggatctaaaa
cccatcatcgaggatcttcaatccatctcaatctgtggccatgtcttccacgagctctgt
ttacagcagtggtttgagtattgttcgaatgggaagaagaaatacagttgtcctgtgtgt
aagcagacctgtgtgggaaaagatgttgcgcggttgtattttcaatctgtgggggatgcg
aatgattcaatgctggctaagaaaccggctgattggattgagaaagatccggagttgttg
agaagtgaggtcaagaggttggagatgagggtatcggtgcttaattcgacattggaaact
caagggaaagatatcaaagagcttcatgaggagcttcaactttgccaggatgaactgaag
aaagaagtaggattgaggaatgatgccatgaaacaaaaaacttcaatgtctcaactgctt
catctcaaatctgaggagctcgaaaacacaactgttgagtgcaaaaggttgcacgaaaga
agtatggctttagctaaagaacttgcagcttttaagttaatatctgaagtggatcttgat
gaagaggaggtcctaaagctttcttcattgggtagtggagcagacaataaagatacaatt
gacattctaaggaaatccttggtcctgcgtaataggagttataaagaactgatggctaag
tgcaatcttcttggaaggggagaggctcgctcttgtaagaaacttgagaaggcaaatgag
aaaataaataagctgaaggtaagggtccaagaactagagaaagccattgaagaaaaagat
aatgaagttctaagaggcttgaaagacgcaaaaaaactaggagttcagggtagtgtttgt
tgtaaatgtaacatggtatcagcaaaaaataagtccgctgctgcaacagatactttagat
tcaactgcaagccagatcaacgaaccgttatcttctagaaaaaagaaaatttatgacttt
ccaagcgatactcgtacaagccatttgaccacggtagatatagctgagaacacatgctcc
tcaatgaataagaaaacttcagaatgttctcaagttgagaatgccaaagattctaccatg
gaaagccaaataagtgaggaaggaaaccgagtgtcttaccatccgcagttgaccagctgc
aatttggtccggaaaaaggcatcagaaagaacaaccaattcagtaaatcctatgccttca
actacagtcagtaatatagtcagaactgctgtcccgggggatgcatgcatgcccttgttg
gttgaagactctgcagaacctgaagctgtccttattaacattaggcgagaatcctctagc
cacatatcactcaataagctaggaggtatgtctttttctggtggactacttggccctagt
ggatcaaatatgtatttgggtaaatggtgcaaacgtggacaaaccaatgactcaagtgca
atgcaaggttcacgttcaggtgaactgattgccgttggtgctgacgggagaggtggacaa
ataaaagtcctgagatctcaaaatgaatcctcactgagtgacgccacatcagcaggaaca
aagaggttcaagaatggagtaaaaaatgttaatatgcgaatagagaacttcttttcaaag
tgctag |
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