Cucumis sativus (cucumber): 101218920
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Entry
101218920 CDS
T02486
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101218920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csv03041
]
101218920
Spliceosome [BR:
csv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
101218920
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101218920
NCBI-ProteinID:
XP_011655023
UniProt:
A0A0A0LTF9
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Position
1:complement(11725480..11732066)
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AA seq
550 aa
AA seq
DB search
MGSKRRSNSLLDEEELGPDLKRHKLLGEVSPSSSPPASENPQLPGFNYGDDDEEEDFKFK
QNGSKYDGDEGDYNDDEEDDEEYDNNGNQVKRSRDVEVRKDCPYLDTVNRQVLDFDFEKF
CSVSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYEIND
PSLDDIRYVLNPRFAKEQVEQLDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSL
MRVTPLRNFFLIPANYQHCRSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKR
FRIGAQSDPVEFMSWFLNTLHSELRITKKSSSIIYECFQGELEVVKEIHSKALIEKKENG
EEQDAGTEGSSVAMETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETI
TEVVRPRIARMRYRVTRLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIPLPT
PKDNDKLRSKYDLIANIVHDGKPNEGYYRVFVQRKSEELWYEMQDLHVSETLPQMVALSE
AYMQIYERQQ
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgaagaggcggagcaatagtcttctagatgaggaagaattgggtccagattta
aagaggcataaattgcttggggaggtgtcaccttcttcttctccacctgcctcagagaat
cctcagcttccgggatttaactatggcgatgatgatgaagaagaagatttcaaatttaaa
caaaatggaagtaaatatgatggagatgaaggggattacaatgatgatgaggaagatgat
gaagaatacgataataatggaaatcaagttaagcgaagtcgtgatgttgaagttcgaaaa
gattgtccttatcttgatactgtaaaccgtcaggttttggattttgattttgagaagttt
tgctctgtctctctgtcaaatcttaatgtttatgcctgcctggtatgtggtaaatactat
caagggagggggaagaagtctcatgcttacactcatagtcttgaagctggacatcatgtg
tatatcaaccttcggacagagaaagtttactgccttcccgatggatatgagattaatgac
ccctcattagatgatattcgatatgtcctgaatccaaggtttgccaaggagcaggtggag
cagcttgacaagaacaagcagtggtctagggcactcgatggttctgattaccttcctgga
atggtggggcttaacaacattaaagaaactgattttgtaaatgtaacaattcagtcctta
atgagagttacaccactcagaaacttcttcctaatacctgcgaactatcagcactgcaga
tctccacttgttcaccggtttggcgaactcacacgtaagatttggcatgcaagaaacttc
aagggacaggtaagcccgcatgaattcctgcaagccgttatgaaggctagtaaaaaacgt
tttcgaataggtgcacagtcagatcccgttgagtttatgtcatggtttcttaacacactt
cattcagaactgcgaattacaaagaaaagtagcagtataatctacgagtgttttcagggg
gaattggaggttgtgaaagagattcactccaaagctctcattgagaagaaagaaaatggt
gaggagcaggatgctggaactgaaggtagcagtgtggcaatggaaacttcaagaatgcca
ttcttaatgcttggattggatctaccgccgccacctcttttcaaagatgttatggagaaa
aatataataccacaggttccactcttcaacattttgaaaaaatttgatggtgaaactatc
acagaagttgtacggccacgtatagcaaggatgcgttaccgggttactcgattgcctcag
tacttaattcttcatatgcggcgatttacgaagaacaacttttttgtggaaaagaatccc
acattagtgaattttcctgtcaagaatctagaattgaaggattacatccccttgccaaca
cctaaagataacgataaattgcgctcaaagtacgatttgattgcgaatattgttcatgat
ggcaaacccaatgaagggtactacagggtatttgtacagaggaagtcggaagaattatgg
tacgagatgcaggatcttcatgtctcagaaacactccctcagatggttgctctctctgag
gcttatatgcaaatatatgaacgacaacaatag
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