Cucumis sativus (cucumber): 101219057
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Entry
101219057 CDS
T02486
Name
(RefSeq) uncharacterized protein LOC101219057
KO
K14315
nucleoporin NDC1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101219057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101219057
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101219057
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
101219057
NCBI-ProteinID:
XP_004134593
UniProt:
A0A0A0KM37
LinkDB
All DBs
Position
6:30340312..30344927
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AA seq
553 aa
AA seq
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MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPS
APFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVRFLVVSGGDNA
SSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYG
CFYVYKKRWVLMFPIIQRPPFFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKN
VTVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFA
ALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALN
LGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQLYAWCARTVSTLTARSHVEDR
FGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASV
GKKKNGPLHSKAYAIADVLRVSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTREL
LLQKLHIFLDFQA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcatcttctccgtttttcggacccccagaaatggttgtcaagaatcgctttctg
ggtttccttatttggcaatttattccttcaacagtcgtgtttttcctcttcaaaatcttc
gtttcagccatttcttctgtttctgttaccaattcctcagctggaactagggacccatct
gccccttttgcttcattgctcactgggttccttacctttcttacatttcatctttctcag
ctccttttttcttcttccctttctcttcttgcttctccccagctcgagagacctgccgcg
ccgcttgagctcgtgtttgggctcgtccggtttcttgtagtttcaggtggtgataatgct
tcatcagcgtcggctttgaaggattttcgccgtcgagctatggtttcgttctatttggtt
ttgtttgttgtggcaactgcggtttcaggttccttggcggcggtttccatatgttggggg
aaatcagatggtcttagaagtgcgtggcatatgggtctcttgatgggtttgatttatggc
tgtttctatgtttacaagaaaagatgggttctaatgttcccaatcatacagcgtcccccc
tttttcagcttcaagatgggttttccatcagctacaacgttggcttccaaactttctgct
gcaaccttcctattttcagcagtattaatggtgcttctgcctgatcaacataagaaaaat
gttacggtcagaaaattcattggtaaccagaccattctattcattggaagttttgcagtt
tttctttcttgggaattgactcaccacttacatcgggtcctacacaccaagaggtttgct
tttgcacctccaaagggttctgcagctgcggaaacaaatcctagtgagcacctctttgca
gctttggaggacagcaactctggatcacttttgcaatatcttgcatttcttgatctctgc
atggtttgtgagactaatgttgatatatggaggagagctgcatttttcgaagaaacaggg
gacacatacaagcgagttatatccatatccttgaggcctctggagcaatttgccctgaac
ttgggtcaaggtttggaaggtgctatggacatgacctcccaactatccagacagttatta
ccgccaaatgactctcacttcgatgtaaaacaattgaaagctcttaaaaactttcagttg
tacgcatggtgtgcccgtacggtttctacattgactgcacgctcacatgtggaagatcga
ttcggagttgcccagctctctgggagtaatgctactgttatgtcaacactattgtcttgc
ctgcttgctgttgaagtgctgatggggaagaagactaatctacaatcttcacacaatcta
ttcggtccagctggtattaaatgggcaacatcgagtattagaagagtagatgcttcagtt
ggtaaaaagaaaaacgggccgctgcactcgaaggcatatgcaattgcagacgtattgagg
gtctcgatttacctcattgttaccgcattccataatgagatggtgaacagtgccaagtct
ggtgttcttgagaaagattggatcacggatgaaaaacccccttttggtactcgcgagttg
cttctgcagaaattgcatattttcttggattttcaagcttag
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