Cucumis sativus (cucumber): 101219226
Help
Entry
101219226 CDS
T02486
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101219226
Membrane trafficking [BR:
csv04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
101219226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_C
TRAPPC9-Trs120
SNAP
Foie-gras_1
Motif
Other DBs
NCBI-GeneID:
101219226
NCBI-ProteinID:
XP_004136715
UniProt:
A0A0A0LB36
LinkDB
All DBs
Position
3:31337662..31359239
Genome browser
AA seq
1288 aa
AA seq
DB search
MDPANTPLGKMLLEEITPVIMVLNTPLVEEACLKNGFSFIQMLSPFCSFNNIDVPVRTAS
DQPYRIKKFSSRLFYGSDIRQPNLEASKDRLKQVITQASEKDISELCSDPPQLKDVINSF
ESAILPSWFHLFNKELIRNVSFSEHEAFDHPVACLLVVSSRDDHPINKLSDLFNTSKLPS
LLNDGTMDPKIMKHYLLLHDNQDGSSEKASKMLAEMRSTFGSNDCQLLCINSSHDGHIER
QDDPWSLFKPDASIGKQLGCFLSNEDLIEIRELMQELSSKHIIPYMEQKIRELNQQVSAT
RKGFRNQIKNLWWRKGKDDAVDSPNGPTYTYNSIESQIRVLGDYAFLLRDYELALSNYRL
ISTDYKLDKAWKRYAGVQEMMGLAYFLLDQSRKEAEYCMENAFNTYLKMGPSGHLNATRC
GLWSAEMLKAREQYREAAAVYFRICNEEPLHSAVMLEQASYCYLLSKPPLIRKYGFHLVL
SGDRYKRMDQINHAIRTYRNAIAVFKGTEWSHIKDHVHFHIGQWYASLGLYDVAVTQMLE
ILDCNHQSKATQELFLKDFLKIIQKAGKTVKVLKLPLPKINISSLKVIFEDHRTYASTTA
ANVRESLWRSLEEDMIPSLSSGRTNWLELQSKIMSKKFKESSICVAGEPVKVDIVFKNPL
QIPISISSVSLICDLSSKSDETESGTNNIIGGVQKNTEFKWSSDWDMGSDNTSYTLSEVH
LSLEENEEKVVQLTVTPKIEGILQIVGIRWKLSDSVLGFHNFIDNPGQKNIAKGRQKAKC
SLADNLKFVVIKSLPKLEGSILSLPQVAYAGDLQRPVLELKNQSKFSVKNLKMKISQSRF
LKIGNQESTNKDFPACLEKPNNREQGVHPIPSTTPNDTFLFPQDTFIQGGTPLLLPLWFR
AAVPGNISLYVSIYYEMEDVSNIMRYRILRLHYNIQVLPSLDLSFQINPCPSRLHEFLVR
MDIINKTSSEIFQIHQLSSIGQSWELSLLQPVDTIFPSRALMPSQALSCFFVLKNINTSF
SSEKKVSSVPVLLASDLKLGPQSSDEQLFDTASFPLAAFHYSERVYQATSNQDPNTVDFM
LITRPLKNTTDPGISESSSLFSHHVCHCSTSSNSPIWWLLEGPRSSYHDFSTSFSEINLK
MTIYNSSNSTASIRIKTSDSASTSEGNETAPQSPNSANLTGWHYASLTQDIKVTSDVLGT
QIGKSSSLESVSPFIWSGTSSTTVQIEPKSMAEAPLQICIFSPGIYDLSNYILQWELLPT
AGSENMETTTSSGTSRGYPHYLTVLQST
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggatccggcaaatacaccactgggcaagatgctgctggaagagatcactccggttatc
atggtgctgaataccccactagtggaagaagcctgtcttaagaatggtttttcattcatc
cagatgcttagccctttctgctcgtttaacaacattgacgtgcccgtacgcaccgcaagt
gatcaaccttacagaattaagaaattcagttcacggttgttttacggttcggacattcgg
caaccaaatttagaggcttcaaaagatcggttgaaacaagttattacacaagccagcgag
aaagatatttctgaattatgctctgatccacctcaacttaaggatgtaattaacagtttt
gagtctgcaattctaccttcatggtttcacctgttcaacaaagagcttatacgcaatgta
tccttttcagaacatgaagcttttgatcatcctgtggcatgccttttggttgtctcttct
cgcgatgatcatcctatcaacaaattatctgacctatttaacacaagcaaattgccttct
cttctaaatgatggtaccatggacccgaagattatgaaacactatttgttgttgcacgat
aatcaagatggctcttcagagaaggcaagtaaaatgctagctgaaatgaggagtacgttt
ggttcaaatgactgccaattactttgcatcaattcttctcatgatggacacattgaacgt
caagatgatccttggagtttgttcaagcctgatgcttcaattggtaagcaacttggctgc
tttcttagcaatgaggatctaattgagataagagagttaatgcaagaattgtcgtcaaaa
catatcattccctatatggagcaaaaaatacgagaattaaaccagcaggtgtctgctacg
aggaaaggtttcagaaatcagattaaaaacttatggtggagaaaggggaaagatgacgca
gtagattctccaaatggcccaacgtatacctataactccattgagtctcagattagagta
ttgggtgattatgccttcttgttgcgggattatgaacttgcattgtccaattatcgcttg
atttcaactgattacaaactcgataaagcttggaaacgctatgctggtgtccaggagatg
atggggcttgcgtactttttactggatcaatcaagaaaggaagctgagtattgcatggaa
aatgccttcaatacttatttgaaaatgggcccatctggtcacctaaatgcaacacgctgt
ggtctttggtcagcagagatgttgaaggcaagagaacagtacagagaggctgctgctgtc
tatttccgtatatgtaatgaggaacctttacattcagctgtcatgcttgagcaagcatct
tattgttacctgttatccaaacctcctttgatacgcaaatatggatttcatctcgttctc
tctggtgatcgttacaaaagaatggaccaaattaatcatgcaattcgtacatatagaaat
gcgattgccgtttttaaaggaactgagtggagccacatcaaagatcatgtacatttccac
attggacagtggtatgcttctcttggtctatatgatgttgctgttactcaaatgttggaa
attcttgactgtaatcatcagtcaaaggcaacacaggaattgttcttgaaggattttctg
aaaattattcagaaagcaggaaagacagtcaaggtgttaaaactaccattgcccaagatc
aacatttcatcattaaaggttatctttgaagatcatcgaacatatgcatcaactacagct
gctaatgttcgagaaagtttatggcggtcgttagaggaagacatgattccatcattatcc
tctgggaggacaaattggttggaattacagtcaaagattatgtcgaaaaagtttaaagaa
tcaagtatttgcgttgcaggagaaccagtgaaagtggacattgtatttaaaaaccctctt
caaatccctatttccatctctagcgtttccctgatatgtgatctttcttcaaaatctgat
gaaactgaatctggtacaaataacataattggtggtgtccagaaaaataccgaattcaag
tggtcatctgattgggacatgggatctgacaatacctcgtatactttgtctgaagttcac
ctctctttagaagagaatgaagaaaaagttgtgcaactgacagttactcccaaaatagaa
ggcatcctacaaattgttggtattagatggaaactgtcagattctgtcttgggttttcac
aattttattgacaatccaggacagaagaatattgccaaggggagacagaaagctaagtgt
tctcttgctgataacctgaagtttgtagtgatcaagagtctaccaaagcttgagggtagc
attctgtcacttcctcaagtggcatatgctggagatttacagcgccctgttcttgaacta
aaaaatcaatccaagttttctgtaaagaatttgaaaatgaagatcagtcaatcacgattc
ttaaaaattgggaaccaagaaagtacgaataaagacttccctgcttgcttggagaagcca
aataatagagaacagggagtacaccccatccccagcacaacaccaaatgacacatttttg
tttccccaggacacttttattcaaggtggaacacccttgttgttgcctctttggtttcga
gctgctgttcctggaaatatatccttgtacgtaagcatatattatgagatggaagatgta
tcaaatatcatgagatatcggattctacgcttgcattacaatattcaggttttgccatcc
ttggatttatcattccaaatcaatccatgtccatcaagattgcatgagtttctcgtccga
atggatattatcaacaagactagctctgagattttccaaattcatcagttgtcatctatc
ggacagagctgggaactttcgttgcttcaacctgttgatacgatttttccttcacgggct
ttaatgcctagtcaagcattgtcatgtttcttcgttctaaagaatattaacacatcgttc
agttccgaaaaaaaagtatcttctgtcccggtgctacttgcaagtgatctaaagttgggt
cctcagagtagtgatgaacaactctttgatacggctagttttcctctggctgctttccat
tattcagaaagagtgtaccaagcaacttcgaaccaggacccaaataccgtggactttatg
ttgatcactcggccacttaagaatactactgatcctggaatttctgaatcatcaagtcta
ttctctcatcatgtgtgccattgtagtacttcaagcaacagtcctatatggtggctactt
gaagggcctcggagttcatatcacgacttctctacttctttcagtgaaatcaatttgaaa
atgacaatctacaactcttcaaactcaactgcatccatacgcattaaaacaagtgattca
gcatcaacgagtgaaggtaatgaaactgctccgcaatcgcccaactctgcgaacctgaca
ggatggcactatgcctcactcacacaggacattaaggtcacatctgatgttcttggaaca
caaatagggaaatcatcttcccttgaaagcgtctccccatttatttggtcaggaacaagc
tcaacaacagtacaaattgaacccaagtccatggctgaagctcctcttcagatctgtata
ttttctcctggaatatatgatctctcaaattacattttacagtgggaacttctaccgacg
gccggttcagaaaacatggaaactaccacatcatcaggaacatctcgaggctatccacac
tatcttactgtccttcaatctacttga
DBGET
integrated database retrieval system
