Cucumis sativus (cucumber): 101219241
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Entry
101219241 CDS
T02486
Name
(RefSeq) chaperone protein ClpD, chloroplastic
Organism
csv
Cucumis sativus (cucumber)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA_5
AAA
Clp_N
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_14
AAA_25
AAA_7
NBD_SMAX1
RuvB_N
IstB_IS21
NACHT
Zeta_toxin
TIP49
Torsin
CbiA
Rad17
ParA
Motif
Other DBs
NCBI-GeneID:
101219241
NCBI-ProteinID:
XP_011658949
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All DBs
Position
7:complement(9739202..9753338)
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AA seq
960 aa
AA seq
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MPAASSSSLINQTSVFDCHKQTHVHGCSRLISPASISSSTCSLGVLSNSHLSGRRINGFP
SSNLVSLFSSSFITSRNCFISGRIQQKRRRLRIPIISAIFERFTERAIKAVIFSQREAKA
LSKDLVFTQHLLLGLIAEEEHNQSPGGFLDSGLTLHVARETVRGIWHNNDAEADTSLHGA
AVTAHVPFSISTKRVFDSAVEYSKQMGHHFIGPEHLSIALLATDDDGSIQLILRSLGVNV
TQLVDAAISRLKGELAKDGREPSSALQWVPKKSTSKKGLPTKVSQKEKENSALARFCVDL
TARASEGFIDPIFGRDSEVERVVEILCRRTKNNPILIGESGVGKTAIAEGLALSIAQADA
PFVLLNKQVMSLDIGLLMSGAKERGELEARVTSLINEITESGNIILFIDEVHSLAELGAS
GGGSKGSGLNFANMLKPSLGRGELQCIASTTIGEYTKQFEKDKALARRFQPVLIEEPSQE
NAVRMLLSIREKYEAHHNCRFTLEAINAAVYLSARYISDRYLPDKAIDLIDEAGSRARME
AYKKRKELQTSILSKSPDDYWQEIKAIQAMHDMNLANKLNDGEVQSSDTSGNNALESTFS
SISDNYEPVVVGPDDIAAVTSLWSGIPVQQLTIDESILLMGLDEQLKKRVVGQDEAVSAI
SRAVKRSRVGLKDPNRPIAVLLFCGPTGVGKTELTKVLARCYFGSEAAMLRLDMSEYMER
HSVSKLIGSPPGYLGYGDGGTLTEAIRRKPFTVVLLDEIEKAHPDVFNIVLQLFEDGHLT
DSQGRRVSFKNALIVMTSNIGSTSIIKGRHHSIGGFFSSEDETSSSYAGMKTLVTEELKG
YFRPELLNRIDEIVVFQPLQKTQMLEILNLMLQEIKERLMLLRIDLELSESVIDLICQVG
YDKAYGARPLRRAVTMIVEDPLSEALLYEDPKPGDTFVIDLDSTGNPFVKNQSNTAFPLV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgccagcggcctcatcttccagtttgattaatcaaacttcggtgtttgattgccataaa
cagacccatgtgcatggttgcagtcgattgatctctccggcttctatttcttcttccact
tgttcgttgggagttttatcgaattcccatttgtctggaaggcgaatcaatggattccca
tcttccaatcttgtatccttgttttcctcttcttttattacgtcccgaaattgtttcatc
agcggtagaatccagcagaagaggaggcggttgaggattccgatcatttctgccattttt
gagcggttcacggaacgagcgattaaggctgtgatattttcgcagagagaggcgaaagcc
ctttcgaaggatttggtttttacccaacatcttcttctgggtttgattgctgaggaagaa
cataatcagtctcctggcggttttttggactccggtcttacacttcatgtggcacgcgag
actgttcgtgggatttggcataacaatgatgcggaagcggatactagtcttcatggtgcg
gctgtcacggctcatgtccctttttctatcagcaccaagcgtgtgtttgattccgccgtt
gagtattccaagcaaatgggccatcatttcattggacctgaacacctttccattgcttta
cttgctactgatgatgatggaagcatacagttgattttgaggagcttaggggtaaatgtt
acacagttggtagatgcagcaatatccaggcttaaaggggagcttgccaaagatggtaga
gagccatctagtgcattgcaatgggtgcctaaaaaatccacttctaaaaaaggtcttcca
acaaaagtctctcagaaagaaaaagagaatagtgctttggctcggttctgtgtggatctt
actgctcgtgctagtgaaggattcattgaccctatttttggtcgagattctgaagttgaa
cgagttgtggagatactttgtcgtagaacaaaaaataaccccattcttattggtgagagt
ggagtaggaaagacagcaattgctgaagggttggctctcagtattgctcaggcagatgcc
ccattcgtactgttgaacaaacaggtaatgtccttggatattggactactcatgtctggt
gcgaaggaaaggggagaattggaggcacgtgttacatccctaattaacgagataactgaa
tcaggcaatattatcctttttattgatgaagtccattcacttgctgagcttggtgcaagt
ggaggtggaagtaaagggtctggtcttaacttcgctaatatgttgaaaccgtcactcggg
agaggagaactgcagtgtattgcttccaccacaattggtgaatacacaaagcaatttgag
aaggataaagcattagcacgtcgattccagcctgtgctaattgaggagcctagccaggag
aatgcagtgagaatgcttctaagcattcgtgagaagtatgaggctcaccacaactgcagg
tttacgcttgaagcaataaacgctgctgtgtatctgtctgcaagatacataagtgatagg
tatcttccagataaggcaattgatctcattgacgaagcaggtagtagagctcgtatggaa
gcctataagaagagaaaagaattacagacttctatactctctaaatcaccagatgattat
tggcaagaaattaaggctattcaggctatgcatgacatgaacctggccaataaactcaat
gatggtgaagtacaaagctcggatacttctgggaataacgccttggagtccactttctct
tcaatatcagataattacgaacctgtagtggtgggaccggatgatattgcagcggttact
tctctttggtcaggcatcccagttcagcagctaacaattgatgagagcattcttttgatg
ggtcttgatgaacaactcaaaaagcgagttgttgggcaagatgaagctgtttctgcaatt
tctcgagctgttaagcggtctcgggttgggctcaaggatcccaaccgaccaatagcagtg
cttcttttttgtggccctactggagttggcaagactgagctaacaaaagttctggcaagg
tgctactttggatcggaagcagctatgctgagattggacatgagtgaatatatggagcgt
cattctgtgagtaaactaatcggatcgcctccaggatatcttggctatggagatggagga
acattaacagaagcaataagacgaaagccatttactgtggtattgcttgacgagatagag
aaagctcatcctgatgttttcaacatcgtcctccagttgtttgaagatggacaccttaca
gattctcagggacggagagtgtcgtttaagaatgcattgattgtaatgacatcaaacatt
ggttccacttcaatcattaagggtagacatcactctatcggtggtttcttttcttcagaa
gatgagacatcaagttcatatgcaggaatgaaaactcttgtgacagaggaactcaagggg
tattttcgtcctgagttgctgaaccggatagatgaaatagttgtgttccaaccccttcaa
aagacacagatgctcgagatcttaaacctaatgcttcaagaaataaaggagaggctgatg
ctgctcaggatcgatctggaattatcagaatcagtaatcgatctcatttgtcaagtgggg
tatgacaaagcttatggggcaagacctcttaggcgagcagttaccatgatagttgaagac
cctttaagtgaggcattgctttatgaagatccaaagcctggtgatacctttgttattgat
ttggattctacagggaacccctttgtcaaaaaccaatccaacactgcatttccacttgtt
tga
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