KEGG   Cucumis sativus (cucumber): 101219246
Entry
101219246         CDS       T02486                                 
Name
(RefSeq) protein RST1 isoform X1
  KO
K27498  focadhesin
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101219246
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     101219246
SSDB
Motif
Pfam: DUF3730
Other DBs
NCBI-GeneID: 101219246
NCBI-ProteinID: XP_011652289
LinkDB
Position
3:complement(34666944..34683856)
AA seq 1860 aa
MDSYAPFLEKLRLPQPSLQRFAVASIFSKLRSAPKHLDSDSASGREAISQCLLHSSPAVV
DQSVRELCRLVKESHIDVSRALIELQAALEGSESRFVDVFVKGLGFLVQFGFRKHNGSWQ
FGSAETHPFVKVLSCRVDVQAQLLHQIPLFMVQNKSLGMEAVCKFLSPFVNYSILKTQFS
DSSSSLFARNLMSSIMSVCCSYPHEAMPILALLIQSLKYVPRRTLEDFWNFIHLVESLVD
ACTVMLRFVVNNGSHLKMEAQQSSIELLDTVLSLYACLDRHVCGCERILELSRYLLSVQK
DLGMQYVPKLSSAFPPLFTILTKSELEHEQLLILKLLVSLLRWKAECEYANRATTRVPSE
ELLFVFPAISLMSSPSKSIKGAATELLSMLEKLLVRLIVTTKDEVEERGFQFPSIRTPGS
IVVQLLEKLWFQGRSSLSSGFFLDFALYGQSNSKDDNDLPRKCWTSKLREYSLWIVERRK
SLLPLTQFEELFVKAYAVAEMSFLVGAITSIMVVHHSLGTDAVELLAAIGTLDPKIGFQL
LLLVLFYCNIFSRKDVQRQDMVLKLLGLLPSLASHSAMVPFIVETISPMLRKDSKPVLYA
TATRLLCQTWEINDRAFGSLQGVLLPKGFSDFNREGEICLSLSASIRDVCRKDADRGVDL
ILSVSACIESPDPINQALGFQGLAHLCEADVIDFYTAWDVIAENPLDYSANPVLANSLCK
LLRWGAIDAEVYPEASKNIIGILLAVGTSTSPSHDLQWSKAKASAFDALAQYEVSLLERN
FQDFKEKSTSVLFTEKNVDVLSAIKDFLVKIIFHEHSNRRRLVKEKRVAGSKIEKLLDVF
PRLVFSSGVRSNVRQLPAAALLCHSFSSRKGNDPTRRTRDEHTSYENAMREIGDSLQLSR
NIAMALLALESWKAFMERWLKSEVLSSDVRDTVVISEKTSKAANEILKRIIHVAEEALPR
CAENMALAIGALCMVLPQAAHAVKSTASKFLLNWLFQHEHELHQWSSAISLGIISRCLHV
TDHKLKFQIVSGLLEVLSVTKSTLVKGACGVGLGYSSHDLFSGVGIVDKSNLGGDKQTTK
IKEVELLGTIVRSLSLMICQLTGSSKDMFEDLFALVPVHSSGISVDSQLLHKNGDPEDDV
WGVAGLVLGLANTIGALYKIGAYDAVLKIKSLISSWFPHGNSVRSGSFDEVSIRVLSVGS
CLALPTMTLFCHRLELVDGDELDHLISAYKEIISDLLPVKRSCTSHQNLLMASCIGAGNL
LAGILNEGVHSIEVARVQDLLELFKRCYSNPYSPLIHFGGMLGVVTAMGVGVGSLFDVHP
TISSVQTEHDLKETSHLLGPLLSSRVCEPLLTSIIQELYLVAQNSDDKKLQQYAAWALSF
LRHNIWSKEFPNLRNLETDVSDSRSSPQNFPTDGVGMRLCNWLMQLNLSETGTATHTETL
VTTLRCLSQAPRLPSLDWGAIIRRCMRYEDQVAELVPPSSALRKGIVREECLKFSLAHAN
QFDQLLIFLDELSDISRFRTLELNLQSCLLTHLAGLMKVFSNARVEKLFNDMKIYMSSFY
SDQLLYNYEKHLLCISCWKGLYQCLDEANLNSLECIAHIEDFMVVLFTMLPTLSSSTNKE
VDEIHSTKEWSEAIRCLSKARQTWLLNFLQISSDDLVPKDQKLFEVLKKMKAKAKLTRNG
SLPMSELGKMKTLMLNLKSQDVWDVLVEVVAALQIAEGNVKRQWVVDVVEISCVSVHPST
AIQFVALLSSSFSKYMPLLTLDPQNVLNNLPVTLNSLLYTSAWSSIAESVASCLFASTER
IYLATQSPNVDGTHGSQPIDESEIDAATSLLDVTHNTCVSLKDFLPFGEQLRLANMNIIT
NT seq 5583 nt   +upstreamnt  +downstreamnt
atggactcgtatgctccatttctagagaaactccggcttcctcaaccgtcccttcaacgt
ttcgccgtcgcttcaatcttctccaagctccgatctgccccgaagcatctcgactccgat
tccgcctcgggaagagaagccatctcccaatgcctcctccactcctctcccgccgtcgtc
gaccaatcagtacgagagctttgccgcttagtcaaggaatctcacatcgacgtctctcgt
gccctcatcgaactccaagccgctctcgaaggatccgaatcgcggttcgttgacgtgttc
gtcaagggactgggtttcctagtccagtttggattccgtaaacacaatgggtcatggcaa
tttggctccgcggaaactcatccgtttgttaaggtgttatcttgtcgagtggatgttcaa
gcccagctcttgcaccaaattccactgtttatggtacaaaacaagtcattgggaatggaa
gctgtctgcaaattcttaagcccatttgtgaactattcaatattaaaaacacagttctca
gactcatcatcttcattatttgcacggaatttgatgtcatcaattatgtccgtttgttgc
tcgtatccgcatgaggcaatgcctatactagctttgttaattcaaagcctcaagtatgtc
ccacgcaggactctagaagatttttggaatttcatacacttggtggaatctttggtggac
gcttgtactgtgatgttaagatttgtagtcaacaatggatcgcatctcaaaatggaggct
caacaaagcagcatagaattgttagatacagttctctccctgtatgcatgccttgacaga
cacgtttgtggctgtgagcgcattcttgaactgtcaagatatttgttgtccgtacaaaag
gaccttgggatgcaatatgtaccaaagctatcttctgccttcccaccattatttacaatc
ctcaccaaatcagagctagaacatgagcaattattgatattgaaacttcttgtatccctc
ctacggtggaaagctgagtgtgaatatgccaacagggcaacaacacgtgttccaagtgaa
gaacttctatttgtctttcctgccatcagtctcatgtcatctccttcaaaatccattaaa
ggggcagcaactgaattgctttcgatgttagaaaagttgttggtgaggctaatagtgaca
acaaaggacgaagttgaggagcgggggttccagtttccatcgattaggacacctgggtct
attgttgttcagcttttggaaaagctatggttccagggccgttcttcactgtccagtgga
ttttttttggattttgctctttatggccagagtaatagcaaagatgataatgatttgccc
agaaagtgttggacatctaaattaagagaatactcattatggattgtcgagagacgaaaa
tcccttttgcccctcactcaatttgaggaattatttgttaaagcctatgctgttgcagaa
atgtccttcctagtaggtgcaatcacttccattatggtggtgcatcattcattgggaact
gatgctgtagagttactagccgcaattggaactttggatccaaaaattggatttcagttg
ctgcttttagttcttttttactgtaatatattttcaagaaaagatgttcaacgccaggat
atggtgcttaaacttttgggattgcttccaagccttgcttcccacagtgcaatggttccg
tttatagttgaaactatttcacctatgcttcgtaaagattcaaaaccagtcttgtatgct
acagcaactcgattgctatgtcaaacctgggaaatcaatgatcgtgcatttgggagtctg
caaggagtcctgcttccaaagggattttctgactttaaccgtgagggagagatttgtctc
agtttatctgcttcaattcgagatgtttgcagaaaagatgcagatagaggagtggatctt
atcttgtctgtttcagcatgcatagaaagccctgatcctatcaatcaagctcttggattt
caaggtcttgcacatctatgtgaagctgatgtcattgatttttacactgcatgggatgtc
attgcggagaatccactggactattctgcaaatccagttcttgcaaatagcctctgtaag
cttctcaggtggggtgcaattgatgctgaggtctatccagaagcttcaaaaaacataata
ggaattcttcttgctgttggcacatcaacttctcctagtcatgatttgcagtggtcgaag
gccaaggcttcggcttttgatgccttagcacaatatgaggtgtcccttcttgagaggaat
tttcaagattttaaagaaaagagcacgtcagttctttttactgagaaaaatgtggacgtc
ctcagtgccataaaagactttctggttaaaattatatttcatgagcacagtaaccgaaga
cgactagtaaaggagaagagagttgctggaagcaagattgagaagctactagatgtcttt
cctcgacttgtcttttcttcaggggtcagaagtaatgtcaggcaactgcctgctgctgca
ctgctttgtcattctttctcttctagaaaagggaatgatcctacaagaagaacacgagat
gaacacaccagttatgagaatgcgatgcgtgaaattggtgattctcttcaactttcaaga
aatattgccatggctctcttagccctagaatcatggaaagcatttatggaacgctggtta
aagtctgaagttttatcatccgatgttagagatactgtcgttatctcagaaaaaacttct
aaagcggctaacgaaattttgaagagaataatacatgttgctgaagaagctttgccaaga
tgtgctgaaaatatggcactagctattggtgcactttgtatggtcttgcctcaggctgcc
catgctgtgaaatctactgcttctaagtttctgttaaattggttgttccagcatgagcat
gagcttcaccaatggtcatctgccatatcccttggaataatctctagatgcctacatgtg
accgaccataaattgaaatttcagattgtctccggacttcttgaggttttaagtgttacc
aagagtactcttgttaaaggagcttgtggagttggcttaggctattctagccatgatctc
ttttctggggttggaattgttgataaatcaaacttgggtggagataagcaaacaaccaag
ataaaggaagtagagttactgggaactatagttagatctttatctttgatgatatgtcag
ctcacgggatcttctaaagatatgtttgaagatctttttgcgttggttccagtacactct
tctggtatcagtgtagattctcagctgttgcataagaatggtgacccagaagacgatgtc
tggggtgttgctggactagtccttggtctggctaataccatcggtgcactgtacaaaatt
ggagcatatgatgctgtcctgaagatcaaaagcttgatttcctcgtggtttcctcatgga
aattctgtacgctctggttcatttgatgaagtttctattagagttctctctgttggatcc
tgtcttgcactaccaaccatgacattgttttgccatagacttgagttggtggatggcgat
gaactggaccatttaataagtgcctataaggagattatttctgacttgttacctgttaaa
agatcttgtacatcccatcagaatttgttgatggcatcatgcataggagcagggaacctc
cttgccggcattctaaatgagggggtgcattctattgaagttgcacgtgtccaagacttg
ctggagttatttaaaagatgttattctaatccttacagtcctttgatccattttggtgga
atgcttggagtagtaactgccatgggagtgggtgttggaagtttgttcgacgtgcatcct
acaatatcatcagttcaaactgaacatgacttaaaggagacttcccatcttctgggccca
cttctttccagtcgcgtttgtgagccactgttgacatcaatcatccaagagctgtatctt
gttgcacagaactctgatgacaagaagctgcagcaatatgctgcatgggcattatcattc
cttagacataatatttggtcaaaggaatttccaaaccttcggaacttagagacagatgta
tctgattcaagatcttcacctcaaaatttccctacggatggtgtaggaatgcggctatgc
aattggctaatgcagctgaatctttcagagacagggacagctacacatactgagactcta
gtaaccacactacggtgtctttctcaagctcccagattgccgtccttagactggggagca
ataattaggcgctgcatgaggtatgaagaccaagttgctgaattggtgccaccaagttct
gctcttagaaagggcatagtaagggaagaatgcttgaagttctcattggcccacgcaaac
caatttgaccaattgcttatttttctcgatgagctctccgacatctccaggtttaggaca
cttgagctgaatctgcagtcatgcctgcttactcatctcgcaggtctcatgaaagtgttc
tctaatgcaagagttgaaaaacttttcaatgacatgaaaatttacatgtcttctttttac
tcggaccaactcctgtataattatgagaagcatttactatgcatctcgtgctggaagggg
ctctaccaatgtcttgacgaagctaatcttaattcattggagtgcatagctcatattgaa
gacttcatggtggttctttttaccatgttacctacattgtcctctagtaccaacaaagaa
gtagatgaaatacactccacaaaagagtggtccgaggcaatcagatgccttagcaaggca
aggcagacctggttgctgaacttccttcagatttcatccgatgatctagtaccaaaagat
cagaagttatttgaagttctaaaaaagatgaaagccaaagccaagctaacaaggaatggt
tctctcccaatgagcgaactaggaaaaatgaaaaccctgatgctgaacttgaaatcacaa
gacgtgtgggacgtactagttgaggttgttgcagctcttcaaattgcagagggtaatgtc
aagagacaatgggtagtcgatgtagtggaaattagctgtgtatcggtgcatccttccacg
gcaatccaatttgttgctttactatcaagtagctttagcaaatatatgcctctactcact
ctggaccctcaaaatgtgttgaacaatctgccagtcacccttaattctcttctgtacaca
tctgcctggagttccattgcggagtccgttgcttcatgtctatttgcctcgaccgaacgc
atctatctggccacccagtctccgaatgtggatggcacacatggctcccaacctattgat
gaaagtgaaattgatgcagctacttcactattagatgtgacgcataatacatgcgtttct
ttgaaggacttcttgccatttggggagcagcttagacttgcaaacatgaacatcatcact
tag

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