Cucumis sativus (cucumber): 101219248
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Entry
101219248 CDS
T02486
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101219248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101219248
03110 Chaperones and folding catalysts [BR:
csv03110
]
101219248
03029 Mitochondrial biogenesis [BR:
csv03029
]
101219248
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csv04147
]
101219248
Enzymes [BR:
csv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101219248
Messenger RNA biogenesis [BR:
csv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101219248
Chaperones and folding catalysts [BR:
csv03110
]
Heat shock proteins
HSP60 / Chaperonin
101219248
Mitochondrial biogenesis [BR:
csv03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101219248
Exosome [BR:
csv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101219248
Exosomal proteins of other body fluids (saliva and urine)
101219248
Exosomal proteins of breast cancer cells
101219248
Exosomal proteins of colorectal cancer cells
101219248
Exosomal proteins of bladder cancer cells
101219248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ATP-synt_DE
Motif
Other DBs
NCBI-GeneID:
101219248
NCBI-ProteinID:
XP_011659644
UniProt:
A0A0A0K765
LinkDB
All DBs
Position
7:complement(21986933..21992744)
Genome browser
AA seq
570 aa
AA seq
DB search
MYRLASKLASSTSRKLVCSRVTSSRSYAAKDINFGDGARAAMLQGVSEVAEAVKVTMGPK
GRNVIIDTSFGSPKVTKDGVTVAKSIQFKDKAKNVGADLVKQVASATNTAAGDGTTCATV
LTQAILTEGCKSIAAGVNVMDLRIGIKKAVDAVISELKSRALMISTPEEITQVATISANG
EREIGELIARAMEKVGREGVITVSDGNTLEDELEVVEGMKLGRGFISPYFINDQKSQKCE
LENPFILIHEKKISDMNLLLRALELAVTNKRALLVVAEDVESDALAMLILNKHRAGLKVC
AIKAPGFGENRRASLDDLAILTGGEVITNERGLTLNKVQVEMLGTAKKVTVSLDDTIILH
GGGDKKLIEERCEQLRTSIDKSTAMFDKEKAQERLSKLSGGVAVFKVGGVSEAEVGERKD
RVTDALNATRAAVEEGIVPGGGVALLHATKVLDELQAQNEDQKRGIEIVQHALRAPTSAI
VSNAGYDGALVVGKLLEQDDRNFGFDAAQGEYVDMVKAGIVDPLKVVRTALVDASSVSLL
LTTAEAAIVEHPNNTNKLPSRMPAMNDMGF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgattagcttcgaaattggcttcctcgacgtcgagaaaacttgtatgtagccgg
gtaacaagcagcagaagttatgcggcgaaggatatcaattttggggatggggctcgtgca
gctatgctacaaggtgtctcggaggttgctgaagctgttaaagtgacaatgggaccaaag
ggtcgcaatgtaattattgatacaagtttcgggagcccaaaagtcacaaaggatggtgtt
actgtagccaaaagcatccaattcaaggataaggctaagaatgttggggcagatcttgta
aagcaagttgcgagtgccacaaacactgctgctggagacggtacaacttgcgcaactgtg
ctgactcaggccattcttaccgagggttgcaagtcaatagctgcaggtgtaaacgtgatg
gatttacgcattggtataaaaaaagcagttgatgctgttatctctgagttgaaaagcaga
gcattgatgataagcaccccagaagaaattacccaggttgccactatttctgcaaatggt
gaacgtgagattggagaactgatagcgagggcaatggagaaagttggaagggaaggagtg
attactgtttctgatggaaatactttggaagatgaattggaagtggtggaaggaatgaag
ctaggcagaggttttatctccccttattttattaacgatcaaaagagccagaaatgtgaa
ctggaaaaccctttcatccttatacatgaaaagaagatttcagacatgaacttactcctg
agagcacttgaacttgcagtaacgaacaaaagggcacttcttgttgtagctgaggatgtt
gagagtgatgcacttgccatgctaatacttaacaagcatcgtgctggcttgaaggtttgt
gcaatcaaagctcctggttttggggaaaatagaagagcaagtttggatgatcttgccata
ctaacgggaggagaggtcatcaccaacgaacgtggtttaactctaaacaaagtgcaagtg
gagatgcttggtactgccaaaaaggttactgtctctcttgacgatacaatcattcttcac
ggaggcggagataagaaacttattgaagaaagatgtgagcagttgaggacaagtattgac
aagagtactgcaatgtttgacaaggaaaaagcccaggaacgattatcaaaactctctggt
ggtgtagcagtcttcaaggtaggtggggtaagcgaggctgaagttggggagaggaaagac
agagtcacagatgccctgaatgccacgagagcagctgtagaggaaggaattgtgccaggt
ggtggagttgcccttttgcatgctacgaaggttctggatgaacttcaagctcaaaatgaa
gaccagaaaagaggaatagaaatagtgcaacatgctcttagggcacctacatctgcaata
gtctcaaatgctggatacgacggtgctttggttgttggaaagttattagaacaggatgac
cgtaatttcggttttgatgctgcccaaggtgaatatgttgacatggtgaaggctggaatt
gtagatccgctgaaagttgtgagaactgctttagtggatgcttccagcgtctcattgctg
ttgacaacagccgaggcagctatagtggaacatccaaataatacgaacaagctcccgagt
agaatgccagcaatgaatgatatgggattctag
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integrated database retrieval system
