Cucumis sativus (cucumber): 101219258
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Entry
101219258 CDS
T02486
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101219258
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101219258
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_28
AAA_15
MMR_HSR1
RsgA_GTPase
AAA_16
AAA_22
AAA_30
AAA_24
VapE-like_dom
AAA_27
Motif
Other DBs
NCBI-GeneID:
101219258
NCBI-ProteinID:
XP_004145757
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All DBs
Position
6:complement(10338811..10342255)
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AA seq
601 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAAAAASSKAAAAAAESQNGVDKLANGVDALQLSDR
TCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLAAI
GCRELPIPEHMDIYHLSREIEASDMSSLEAVISCDEERLKLEQEAESLAAQDDGGGEQLD
RIYERLEALDAATAEKRAAEILYGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTVL
LLDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGVCTNIIHMQNRKLKIYTGNY
DQYVQTRSELEENQMKMYKWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGG
LTEKVVRDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYRNLDFGVDLDSRVALVGP
NGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLAEKLDLEVSALQFMIREYPGNE
EEKMRGAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETI
DSLAEALNEWDGGLVLVSHDFRLINQVAEEIWVCENQAVTKWEGDIMDFKAHLKMKAGLA
D
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggtttccgacgcgagtaagaagaaagcggctcagaagaaggcggctgcggcagccaag
cgaggaggaaaggcagcggcggcggctgcttcttccaaggcggcagcggcagcggctgaa
tcacaaaatggagttgataagttggccaatggagttgacgctcttcagttatccgatcgg
acttgtactggtgtgctttgttcacatcctctatccagggatatccgaatagaatcttta
tcagttacctttcatgggcatgatcttattgttgattctgagctggagctcaattatggc
agacgttatggtttgcttggattgaatggatgtggtaaatctacacttcttgcggcaata
ggttgtcgtgagcttcctattccagaacacatggatatatatcacctttctcgagagatt
gaagcttctgacatgtcttcacttgaggctgttataagttgtgatgaggagaggttgaag
ttggagcaggaggcagaatccttggctgcacaagatgatggaggtggggagcaacttgat
cgtatctatgaacgtttagaggcattggatgcagccactgcagaaaaacgggctgctgaa
atcctgtatggtcttgggtttaacaagcagatgcaagcgaagaaaactcgagacttttct
ggtggttggaggatgaggattgccttagctcgtgccttattcatgaatcctactgtcctc
ctactggatgaaccaactaatcatttagatctagaggcttgtgtctggctggaagaaaat
ttaaagaaatttgaccggatcctggttgtggtttcgcattcccaggactttcttaacggt
gtctgcacaaacattattcacatgcagaacagaaagttaaagatctatacaggtaactat
gatcagtatgttcagacccgttctgaactggaagagaatcagatgaaaatgtataagtgg
gaacaggaccagattgcttccatgaaagagtatattgctagatttggtcacgggtcagcg
aaattagctcggcaggcgcaaagtaaggagaaaacactggcaaaaatggagaggggtggc
cttactgaaaaggtggtgagagacaaggttcttgtcttccgctttgttgatgttgggaag
cttcccccaccggttctccagtttgtggaagtaacgtttggctatacccctgacaatcta
atctacaggaatcttgactttggagttgatttggactctcgggtagctttggttggaccc
aatggtgctggaaagagtaccctgttgaagctgatgacaggggacctggttcctctagat
ggcatggtccgaagacacaaccacctcaggattgcccagtttcatcaacatttagccgag
aaactagacttggaagtgtctgctctccagtttatgatacgagagtacccaggaaatgaa
gaagagaagatgagaggagcaattgggaagtttgggctctccggcaaagctcaagtgatg
ccaatgaagaatttgtctgatgggcagaggagccgtgttatattcgcctggttggcatgg
agacaaccccacctgttattgcttgatgaacccacaaatcatttggatattgagactatt
gattcactggcagaggcactgaatgaatgggatggaggtttggttcttgtaagtcacgat
tttaggcttataaaccaagtggccgaggagatatgggtgtgcgagaatcaagctgtaacc
aaatgggagggtgacattatggacttcaaggcacacttgaagatgaaggctggattagct
gattaa
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