Cucumis sativus (cucumber): 101219281
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Entry
101219281 CDS
T02486
Name
(RefSeq) transcription elongation factor SPT6 homolog
KO
K11292
transcription elongation factor SPT6
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csv03021
]
101219281
03036 Chromosome and associated proteins [BR:
csv03036
]
101219281
Transcription machinery [BR:
csv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101219281
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101219281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
HTH_44
Tex_central_region
Spt6_S1
HHH_9
SH2
HHH_3
Motif
Other DBs
NCBI-GeneID:
101219281
NCBI-ProteinID:
XP_011649014
UniProt:
A0A0A0LKK6
LinkDB
All DBs
Position
2:complement(6481599..6493960)
Genome browser
AA seq
1625 aa
AA seq
DB search
MRLDTDEDDREPLDGDDVDGHNMGDEEDEEDEEGEDEYEKDGFIVDDVEEEDEEDVEERE
DSDDERQKKKKRKKKEEYVLDEDDYELLEDNNISIQRPKGSKKFKRLKKARRDNLEPSGF
SDDEDFVESSRGGRTAEEKLKRSLFGDDEAPLEDIAEEEEQPEEEEDADIGDEDEMADFI
VDEEEDEDGAPIRRKKLKKKKSRQAPGVSSTALQEAHEIFGDVDELLQLRKRELDTQEWR
EKRLEDEFEPIVISEKYMTEKDDQIREIDIPERMQISEESTGSPPTDDASLDDEASWIHG
HIANGVSSLSSNASGQDLSVTKDDILRYLDLVHVQKLDIPFISMYRKEEILSLLKDTEHE
AGDDQDKNDKAPTLRWHKLLWAIQDLDKKWLLLQKRKKALQSYYKNRYLEEIRTAEHVTR
TTLNRQLFDSVNRSLEAAESEREVDDVDSKFNLHFPPGEVGVDEGQFKRPKRKSLYSICS
KAGLWEVAGKFGYSSEQFGLQLSLEKMRNDELEDPKETPEEMASNFTCAMFESPQAVLKG
ARHMAAIEISCEPCVRKHVRSYFMDYAVISTSPTADGNVAIDSFHQFSVVKWLREKPLNR
FEDAQWLLIQKAEEEKLLNVTLKLPEKHLNKLISDFNEYYLSDGVSKSAQLWNEQRKLIL
QDALSGFLLPSMEKEARSLMTSKAKKWLLMEYGKNLWSKVSIGPYQHKENDISSDEEAAP
RVMACCWGPGKPATTFVMLDSSGEVLDVLYTGSLTLRSQNVNDQQRKKNDQERVLKFMTD
HQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDVGHEMDGLSIVYGDESLPRLYENS
RISSDQLQGQSGIVKRAVALGRYLQNPLAMVATLCGPGREILSWKLNPLENFLTPDEKYG
MVEQVMVDVTNQVGLDTNLAISHEWLFSPLQFIAGLGPRKAASLQRSLVRAGSIFTRKDF
VTAHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPESYALAQELAKDVFDED
VKGDANDDEDAEMAIEHVRDRPHLLRTLDVDEYAKSKKREDKIETFLDIKRELMQGFQDW
RKQYEEPSQDEEFYMISGETEDTLAEGRIVQATVRKVLGQKAICGLESGLTGMLMKEDYA
DDSRDISDLSDRLREGDIVTCKIKSIQKNRYQVFLVCKESEMRSNRHQITQNLDPYYHED
RSSLQSEQEKSRKEKELAKKHFKPRMIVHPRFQNITADEAMELLSDKDPGESIVRPSSRG
PSFLTLTLKIYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIGEDTFEDLDEVMDRYVDP
LVAHLKAMLSYRKFRRGTKAEVDELMKIEKSEYPMRIIYGFGISHEHPGTFILTYIRSTN
PHHEYIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPQHDSAPSIRSVAAMVPMRSPATG
GSSAASAGSPWGGSSHEGGWRSQSFDRDRSSTPGSRTGRNDNRNSSGRDGHPSGLPRPYG
GRGRGRGSYNNNRGNNDRSDSGYDGSRWDSSSKDGDDGLSNFPGAKIHNSPGKEAFPGGW
SSGGGGGGNGWNESSGGGGGGGGGGGSGSGGGGSGSGGGGWGGTGGNSKGNWSGSGGSNS
GGWGS
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcgatactgatgaggacgaccgtgaaccacttgacggtgacgatgtcgacggt
cacaacatgggggacgaggaagacgaagaagatgaagaaggagaggacgagtatgaaaag
gatggtttcatagttgatgatgttgaagaagaagatgaagaagatgtggaagagagggaa
gacagtgatgatgaaaggcagaagaagaagaaacggaagaaaaaggaggagtatgtgctt
gatgaagatgattatgaactccttgaggacaacaatattagtattcaacggccaaaggga
agcaagaagtttaagaggcttaaaaaagctcggagggacaatttggagccatctgggttt
tcagatgatgaagattttgtagaaagcagcagaggtggacgaactgctgaggaaaaactt
aaacgtagcttgttcggtgatgatgaagctccacttgaggatattgcggaagaggaggaa
caacctgaagaggaagaagacgctgacattggagatgaggatgaaatggctgatttcatt
gtagatgaagaagaagacgaagatggggctcccataaggaggaagaagttgaagaaaaaa
aagtccaggcaagcacctggtgtttcatcaactgctttgcaggaggcacatgaaattttt
ggtgatgtcgatgaactccttcaacttcgcaagagagaattggatactcaagagtggcgt
gagaagagattagaagatgaatttgaaccaattgtaatttctgagaagtatatgacagaa
aaggatgaccagataagggaaatagatatacccgaaagaatgcagatttccgaggaaagc
actgggtctcctcctacggatgatgcaagtctggatgatgaagcctcatggatacatggt
catattgcaaatggagtgagctctttgtctagcaatgccagtgggcaagacttatctgta
acaaaggatgatattctgcggtatctggatcttgtacatgtccaaaaattagatatacca
ttcatttccatgtataggaaggaggagatcctaagcttgttaaaagatacagaacatgaa
gctggtgatgatcaggataaaaacgataaagcaccaacattaaggtggcataagttactt
tgggcaattcaagacttggacaaaaagtggctgcttcttcaaaagcgaaaaaaggctctt
caatcatattataaaaaccgatatttggaggagatacgtacagctgaacatgtaactaga
accacactaaatcgccagctttttgactctgtgaatagatctctcgaggccgctgaatca
gagagagaggtagatgatgttgactctaaatttaatttgcattttcctcctggtgaagtt
ggtgttgatgaaggacaattcaaaaggcctaaaaggaaatcactgtacagtatatgtagt
aaggctggtttatgggaggttgcaggaaaatttggttatagctctgagcaatttgggttg
cagctgtccttagaaaaaatgagaaatgatgagttggaggatccaaaggaaacacctgaa
gagatggcatcaaactttacctgtgcaatgtttgagagtcctcaagctgtactcaaggga
gctaggcatatggctgctattgagattagttgtgaaccttgtgtaaggaagcatgttaga
agctactttatggactatgccgtgatatcaacaagtcctactgcagatggaaatgttgca
atagattcttttcatcaattttcagttgttaagtggctccgtgaaaagccattgaataga
tttgaggatgcacaatggcttcttattcagaaggctgaagaagaaaaacttctgaatgtc
actctcaagctacctgaaaagcatttgaataagttgataagtgactttaatgaatattat
cttagcgatggggttagcaaatctgctcagctttggaatgagcagagaaagttgatattg
caggatgcactttctggttttcttctgccttcaatggagaaagaagcaagatccctgatg
accagtaaagctaaaaagtggttacttatggaatatggaaagaatttatggagtaaagta
tctattggtccatatcaacacaaagaaaatgatattagttctgatgaagaagctgcccca
agggtaatggcatgctgttggggtcctggaaaaccagctaccacctttgtgatgctagac
tcatcaggcgaggtgcttgatgttctttacactggatctctcaccctacgttctcaaaat
gtgaatgaccagcaacggaagaaaaatgatcaagagcgagttttgaagttcatgacagat
catcaaccacatgttgtcgttttaggagctgttaatttatcttgtacacgattgaaggat
gatatttacgagattatttttaagatggtggaggagaatcctagagacgttggacatgag
atggatggattaagcattgtatacggcgatgagtcccttcctcgtctctatgaaaattct
aggatttcctctgaccaattgcaagggcaatcaggcattgtgaagcgtgctgttgctctt
ggacgttatctgcaaaatccactagctatggttgcgacactttgtggtccaggaagggag
attttatcttggaaactaaatcctttggagaattttttgaccccggatgaaaaatatggg
atggttgaacaggtcatggtggatgtgacaaaccaggttggcctggatactaatttggct
ataagccatgaatggttgttcagcccattgcaattcatagctggtctaggaccaaggaag
gcagcttctttacagagatccttggtgagggctggatcaattttcacacggaaggacttc
gttacagcacatggccttggtaaaaaagtatttgttaatgcagttgggttcttgcgtgtt
aggcggagtgggttggctgcaagcagtagccaatttatagatttgttggatgatacgaga
attcacccagaatcatatgctctggcacaagagttagcaaaagatgtttttgatgaagat
gttaaaggtgatgcaaatgacgatgaggatgcagagatggccatagagcatgttagagac
cggcctcatttactaaggactcttgatgttgatgaatatgccaagagcaagaaacgagaa
gataaaatagagacttttcttgacataaaaagggaactgatgcagggttttcaggattgg
cgtaagcaatatgaagagcccagtcaggatgaagagttttacatgatatctggtgaaact
gaggacacccttgcggaggggagaattgtgcaggctacagtccgcaaggtgctaggtcaa
aaagcaatttgtggacttgaatctggattgactgggatgcttatgaaagaagattatgca
gatgattctagagatatctctgatttgtctgacaggttgcgtgagggggacatcgttact
tgcaagatcaaatcaattcagaagaataggtaccaggttttccttgtttgtaaggagagt
gagatgagaagtaaccggcaccagattactcagaatcttgatccttactatcatgaagat
cgaagcagcctacagagtgagcaagaaaagtctcgaaaagagaaggaacttgcaaaaaag
catttcaagccaagaatgattgttcaccctcgattccagaatataacagcagatgaagca
atggagctcttgtctgacaaggatcctggtgaaagtattgttcgacctagttctcgtggg
ccttcttttttgactttgacgcttaaaatttacgatggagtatatgctcacaaagatata
gttgaaggtggaaaggagcataaagacatcactagcttgctgcgaattgggaagaccctg
aaaattggggaggacacttttgaggatctggatgaggtgatggatcgttatgttgatcct
ttagttgctcacttaaaggcaatgctaagctatcgcaagtttaggaggggcacaaaagca
gaagttgatgaacttatgaagattgagaagtcagagtatccaatgagaataatttatggt
tttggaatatctcatgaacatccgggtacattcattttgacatacatacgaagtaccaat
ccacaccatgaatatattggtctctatccaaagggattcaaatttaggaaaagaatgttt
gaagatattgatagacttgtagcgtattttcaaaggcacatcgatgatccccaacatgat
tcagcaccatcaattagatcagttgctgctatggtaccaatgcggagtcctgcaactggt
ggctcttcagcagcatctgcaggtagcccttggggtggttcatcacatgaaggtggctgg
agaagccagtcatttgacagggatcgttcttctactcctgggtctagaacagggagaaat
gacaacagaaactctagtggtcgtgatggacatccaagtggtctgcctagaccatatgga
ggacgtgggcgtggtcgaggctcatacaataataacagagggaataatgatcggtcagat
tctggttatgatggctccagatgggattcatcttccaaggatggggatgatggattaagc
aacttcccaggagctaaaattcataattcaccaggcaaagaagcctttcctggtggctgg
agctccggtgggggtgggggtggtaatggatggaatgagagcagtggcggcggcggcggc
ggtggtggtggtggtggcagtggcagtggtggtggtggcagtggcagtggcggtgggggt
tggggtgggactggtggaaattccaaaggaaattggagtggttctggtggaagcaacagt
ggggggtggggttcttaa
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integrated database retrieval system
