Cucumis sativus (cucumber): 101219330
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Entry
101219330 CDS
T02486
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csv03036
]
101219330
Chromosome and associated proteins [BR:
csv03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
101219330
Condensin II
101219330
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
SlyX
CLIP1
FlaC_arch
Rod_CreS
ABC_tran
YuzC
CCDC39
Motif
Other DBs
NCBI-GeneID:
101219330
NCBI-ProteinID:
XP_011655432
LinkDB
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Position
5:22657619..22682838
Genome browser
AA seq
1245 aa
AA seq
DB search
MVSTEPVDDLMPQTANSTNGASTTPRLFIKEMVLSNFKSYAGEQRVGPFHKSFSAVVGPN
GSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLESASVSVHFQEIVDLDDGAY
EAVPGSDFVITRAAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQI
SLMKPKAQGPHDEGFLEYLEDIIGTIKYVEMIDESNKQLEALNEKRTGVVQMVKLAEKER
DGLEGVKNEAEAYMLKELSHLKWREKASKLAHEDTTKRITELQDEVSTLEANKKTEREKI
RETSKELKELEAVHEKNMKRKEELDNDLRRSKEKFKDFERQDIKYREDLKHIKQKIKKLD
DKLEKDSTKIDGLRKECEESTSLIPKLEESIPQFQKLLTDEEKILDEIQESSKVETERYR
SELAIVRVELEPWEKQLTEHRGKLNVACTESKLLSQKHEGGRAALDDARKQMVNILKNIE
EKSTKLEQIKTELQKRKLETLKAQEEEQECIKEQGSLIPVEHAARQKVAELKSVMDSEKS
QGSVLKAILKAKKTNEIEGIYGRMGDLGAIDAKYDVAISTACPGLDYIVVETSGAAQACV
ELLRRENLGVATFMILEKQVDHLSKLKAKVSTPEGVPRLFDLIKVQDDRMKLAFFAALGN
TVVAKDLEQATRIAYGGNRDFRRVVTLDGALLEKSGTMSGGGRMPRGGKMGTSIRSASVS
KEAFVKAEKDLSDMVDALNRIRLRIADAVQLYQVSEKAVEQLEMLLAKSQQDIDSLTSQH
SYLEKQLSSLEAASKPKDDELNRLEELRNFILEEEKEISRLVLGSKKLTEKALEIQSQIE
NAGGERLKAQKSKVTKIQSDINKTRTDINRYKVQIESDQATMKKLTKAIEDSKKEKERLE
EEKNNLQGKFKDIEVKAFAVQENYKETEKLIHLQEEVCDTSKANYNKVKKTMDELKGSEV
DTEYKLQDLKKLYKELELKEKGYRTKLDDLQTALSKHMDQIHKDLVDPEKLQATLAEDIV
ECRDLKRALEMVTLLDAQLKEMNPNLDSITEYRRKVEVYNERVEDLNTVTQQRDIVKKQY
DELKKKRLDEFMSGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKS
WKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA
QFIIISLRNNMFELADRLVGIYKTNNCTKSITINPRSFSVCEKIA
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggtttccaccgaacctgtggatgacctgatgccccaaaccgcgaattctaccaatgga
gcttccacaactcccaggcttttcattaaggaaatggttttgtccaacttcaagtcctac
gctggtgaacaacgggttggacccttccataagagtttctctgcagtggttggacccaat
ggcagtggaaaaagtaatgtaattgatgccatgttatttgtcttcggaaagcgagctaaa
cagatgcgactcaacaaagtttcggagctaattcataattctaccaatcaccagaattta
gagagtgcaagtgtttcagttcacttccaagaaatagttgatctggatgatggagcatat
gaagctgttccaggaagtgactttgttataacccgggctgccttccgtgataactcttct
aaatattacattaataatcgtgcaagtaacttcactgaagttaccaaaaaattgaagggt
aaaggagttgacttggacaacaatcgctttttaattcttcagggtgaagtggagcagatt
tcactgatgaagccaaaagctcaaggacctcatgatgagggctttcttgaatatcttgag
gatataatcggaaccatcaaatatgttgaaatgattgacgagtcaaacaagcagctagag
gccctcaatgagaaacgtaccggtgtggtgcaaatggttaagttagctgagaaggaaaga
gatggcttggagggggtgaagaacgaagcagaagcatacatgttgaaagaattatcacat
ttaaagtggcgagagaaagcctctaaactagctcatgaggatactacaaagagaataact
gaactgcaagatgaagtgtccaccttagaggcaaataagaaaactgagagggaaaagatt
cgtgaaactagcaaggagttgaaggagcttgaagctgtgcatgaaaaaaatatgaaaaga
aaagaggaacttgataatgacttgcgaagatccaaggaaaaatttaaggactttgaacgt
caggatattaaataccgtgaggatttgaagcacataaagcaaaagattaagaaacttgat
gataagcttgaaaaggattctacaaaaattgatggcttaagaaaggagtgtgaagaatca
acaagcttgattccgaagcttgaggagagtattccacaattccaaaaacttctcacagac
gaggaaaaaatcttggacgagattcaagagagttcaaaagttgaaactgagaggtaccgc
tcagagcttgcgattgttcgtgttgagctagaaccttgggaaaagcaactgactgagcac
agagggaaacttaatgtcgcatgtactgagagcaaactattgagtcagaagcatgaaggt
ggtcgtgcagctcttgatgatgctcgcaagcagatggttaacatactgaaaaacatagaa
gaaaagtctacaaagcttgaacagattaaaactgagcttcaaaagagaaaattggaaacc
ttgaaagctcaagaagaagagcaagagtgtattaaggaacaaggctcacttattcctgta
gaacatgctgctagacagaaggttgcagaacttaaatctgttatggattcagagaaaagt
cagggatcagtgcttaaagcaattttgaaggcaaagaaaaccaacgagattgagggcata
tatgggcgaatgggtgatttaggtgctattgacgcaaagtatgatgttgcaatatcaacg
gcttgccctggacttgattatattgtagtggaaacatctggtgctgcacaggcttgtgta
gaattactgcgaagagaaaatcttggtgttgcaactttcatgatattggagaagcaggtt
gatcatttgtcaaagttgaaggcaaaagttagcactcctgagggggttcctcggcttttt
gatttaattaaggtacaagatgataggatgaagcttgccttctttgctgcattggggaat
acagttgttgctaaggatcttgagcaggcaacacgaattgcatatggtggtaatagagat
tttcgacgtgttgtaactcttgatggcgccctgttggaaaaatctggaaccatgagtggt
ggaggacgtatgcctcgtggtggtaagatgggtacatcaattcgatctgccagtgtgtca
aaagaagcatttgtaaaagctgagaaagatctttcagatatggttgatgcactgaacaga
atccgtctaagaattgctgatgctgtgcaactttaccaagtttcagagaaagcagttgaa
caattagagatgttattagcaaaaagtcaacaagatattgacagtttgacttcacaacac
agctatcttgaaaaacagttaagttcccttgaggctgcatcaaaaccaaaagatgatgag
cttaatcgactggaggagctgaggaattttatcttggaagaggagaaagagatcagtaga
cttgtgctaggatcgaaaaagctaacagagaaggcattagaaattcagagtcagatagaa
aatgctggtggtgaaagattgaaagctcagaagtccaaagtgactaagattcaatctgat
attaataagaccagaacagatatcaatcgctataaagttcaaatagaatcagaccaagca
acaatgaagaagttgacaaaggctattgaagattcaaaaaaggagaaggaacggcttgag
gaggagaagaataatttgcaaggaaaattcaaagatattgaagttaaagcatttgcagtt
caagaaaattataaagagaccgaaaagctaattcatctgcaagaagaagtctgtgacaca
tccaaagccaactataacaaagtcaagaagactatggatgaactcaaaggatcagaggtt
gacactgagtacaaactacaagatttgaagaagttgtacaaagaattagagttgaaagag
aagggttacaggacaaagcttgatgatttgcagactgctttatcaaagcatatggatcaa
attcataaagatcttgttgaccccgagaagcttcaggcaactcttgcagaagacattgtt
gagtgtcgtgacctgaaaagggctcttgaaatggtaacactgcttgatgcacaactaaaa
gaaatgaatccaaaccttgattcaatcactgaatatcgaaggaaagtggaggtgtataat
gaaagagttgaggatctcaatacagtcactcagcagcgtgatatcgtgaagaagcaatat
gatgaattgaagaaaaaaaggttggacgagtttatgtccggatttaatactatatctttg
aagttgaaggaaatgtaccagatgatcacacttggaggtgatgcagaacttgagctggtg
gactctttggaccctttctctgaaggtgttgtttttagtgtcaggccaccgaaaaagagc
tggaaaaatatcgctaacttgtctggtggtgaaaagactctaagctctttagctcttgtt
tttgctcttcatcactacaaaccgactccgctttatgtgatggacgaaatcgatgctgct
ttagatttcaaaaacgtatcgattgttgggcattatgtgaaggacagaaccaaggatgct
caattcatcattataagcttgaggaacaatatgtttgaattagcagacagactagtgggg
atctataaaaccaataactgcacaaagagcataaccatcaatccaagaagcttttcagta
tgtgagaaaattgcttga
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