Cucumis sativus (cucumber): 101219394
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Entry
101219394 CDS
T02486
Name
(RefSeq) cell division control protein 48 homolog E
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101219394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101219394
03009 Ribosome biogenesis [BR:
csv03009
]
101219394
04131 Membrane trafficking [BR:
csv04131
]
101219394
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csv04147
]
101219394
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
101219394
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
101219394
Membrane trafficking [BR:
csv04131
]
SNARE
SNARE associated proteins
Others
101219394
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101219394
Exosome [BR:
csv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101219394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
IstB_IS21
AAA_lid_PRS2_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
Vps4_C
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Zot
RNF220
hNIFK_binding
Motif
Other DBs
NCBI-GeneID:
101219394
NCBI-ProteinID:
XP_004137832
UniProt:
A0A0A0LFS9
LinkDB
All DBs
Position
3:complement(29976159..29981445)
Genome browser
AA seq
804 aa
AA seq
DB search
MANQPESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPLRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCDGEPVKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEEVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRLQI
FKACLRKSPISKDVELRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRKSEN
PEAMEEDADDEVAEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGAEFRFEQ
SSAPAASDPFATSAGGGDEDDLYN
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcaacctgaatcctctgactccaagggtaccaagagggactttagcaccgcc
attttggagcggaagaaggcccctaatcgtcttgttgtcgacgaagctatcaacgatgat
aactccgtcgtcgctcttcatcctgataccatggagaagcttcaactcttccgtggagat
acgatcctcattaagggtaaaaagaggaaggacacaatatgcattgctcttgctgatgat
acatgtgatgagcctaaaataaggatgaacaaggtcgtgagaagcaatcttagggttagg
cttggtgatgttgtctctgtgcaccaatgtgctgatgttaagtatgggaagcgtgtacac
attcttcctgtggatgataccattgaaggagttactgggaatctttttgatgcttatttg
aaaccctatttcttggaggcatatcgtcctttgaggaagggtgacctcttccttgtgagg
gggggaatgaggagtgtagagttcaaggttattgagacagatccagctgaatactgtgtg
gttgccccagacactgagatcttttgtgatggagagcctgtgaaaagggaggatgaggat
agattggatgaagttggttatgatgacgttggtggtgttaggaaacaaatggctcagatt
cgtgaattggttgaactgccactgaggcatccgcagctgtttaaatcaattggtgtgaag
cctcctaagggaattttgctgtatggaccccctgggtctgggaagactttgattgcacgt
gctgttgcaaatgaaactggtgcatttttcttctgtatcaatggaccagagatcatgtca
aagttggctggtgaaagtgaaagtaacctcagaaaagcttttgaggaagcagagaaaaat
gcaccgtccataatttttatcgatgaaattgattcaattgctcccaagcgtgagaaaacc
aatggggaagttgaacgaaggattgtctctcaactactgaccctcatggatggactgaag
tctcgtgctcatgtcattgtgattggggctacaaatcgacccaacagcattgacccagct
ctgagaagatttggaagatttgatagggaaatagacattggtgttcctgatgaagttggg
cgtctggaagttctacgaattcataccaaaaacatgaaactcgctgaagaagtcgatttg
gagaggattgctaaagatacgcatgggtatgttggtgctgatctggcagctctctgtact
gaggctgctcttcaatgtatcagagagaagatggatgtaattgatttggaagatgactct
atagatgctgagatactcaattcaatggcagttacaaatgagcatttccagacagctctt
ggaaccagcaacccatcagctcttcgtgaaacagttgttgaagttccaaatgtttcatgg
gaggatattggaggtcttgagaatgttaagagagagctccaagagacggttcaatatcca
gttgaacatcctgagaagtttgagaaatttgggatgtcgccctcaaaaggagttcttttc
tacggccctcctggatgtggaaagactcttctggcaaaggctattgcaaatgaatgtcaa
gctaactttattagcgtcaagggcccagagttgctcacgatgtggtttggagagagtgag
gccaatgttcgtgaaatctttgacaaggcccggcagtctgctccttgtgtcttgttcttt
gacgaacttgactcaattgctacacaaagaggtagtagtgttggggatgctggaggtgct
gctgatcgtgtactgaaccaacttcttacggaaatggatggaatgtctgcgaagaaaact
gttttcattattggtgccaccaacagaccagacattatagatcctgctcttttacgacct
ggtcgtctcgatcagttgatttatattcctcttcctgacgaagaatctcgacttcagatt
ttcaaggcttgcttgaggaaatctccaatctcaaaagatgtggaactcagagcccttgcc
aagtatactcaaggcttcagtggtgctgatattacagaaatttgtcagcgtgcctgcaaa
tatgcaattagagagaacattgagaaggacattgagaaggagaggaggaaaagcgagaac
cccgaggcgatggaggaggatgctgatgatgaagtggccgagatcagggctgctcacttt
gaggaatctatgaagtatgcccgaaggagtgtcagtgatgctgacatccgcaaataccag
gcatttgcacaaacacttcagcagtcaagagggtttggagccgagttcaggtttgagcag
agctcagcaccagctgcatccgacccatttgcaacttctgctggtgggggtgatgaagat
gatctctataactag
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integrated database retrieval system
