Cucumis sativus (cucumber): 101219408
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Entry
101219408 CDS
T02486
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03440
Homologous recombination
csv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101219408
03460 Fanconi anemia pathway
101219408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csv03400
]
101219408
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
101219408
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
HHH_2
Motif
Other DBs
NCBI-GeneID:
101219408
NCBI-ProteinID:
XP_004142395
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All DBs
Position
5:28752844..28759670
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AA seq
667 aa
AA seq
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MDRQRSPAVFCPENEDLAEFMWQKRLEMAATPKGISDKVDMTLYKAYLNVCNSKVSITSM
KDLSQIKGVGKWILKQVQDFFKSGSDGSEPEELAGKGKKTKGTRRYVPQKNSVAYALLIT
LYRGTTNGNEYMRKQELIDAAEASGLSRVAIAPEKGKGKPSQFGSSSRDWYSGWSCMKTL
ISRGLVVKSNCPAKYMLTEEGQQVARECLMRSGLLSSSKNFDNTKGSSILESCDISNHSA
NYLDSDVEVTSPSVSQSTKHKSIDVPLESLERFMRMGYSKHQVINSFKEVSKDNPNKDIS
SLWPAVLCRLREDLVYGQVEAIGRENRSMGSSLEGSEPKNVVNVNGERSFSSRACSSSNP
SIIESRRDSVKGNTNILSMPPLSFGEKFEDCYNVVLILDDREQFAKHSSRSRRMIENICS
QFKIQIEIRRLPVGDGIWVARHKHLDNEYVLDFIVERKDVEDLRCSIRDNRYRDQKLKLL
RCGLKRMIYLVEGDPNSSEAAESIKTACFTTEILEGFDVQRTSGLSDTLKKYGYLTHAIT
QYYILQASDDRVSHSDVCPRLDQFIKKCQELDKMTVSDVFALQLMQVPQVTEEVAVAVLD
LYPTLLSLVRAYSLLVSSIFYFIKLPILPLISCFLGIGIGFIHICERNNVPIISWDNILQ
VNQFTYY
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcaaagatctccggcggtcttttgtccggagaacgaagaccttgctgaattc
atgtggcagaagcggctagaaatggcggcgacacctaaaggaatctctgacaaagtcgat
atgactctatataaagcttatttgaatgtttgcaactctaaggtctccattacgtccatg
aaggatctctctcagatcaaaggcgttgggaagtggattcttaaacaagtacaagatttt
ttcaagagtggttctgatggttctgaacccgaggaattggcgggaaaaggtaagaaaaca
aaggggaccaggcgctatgttccacagaagaactcggttgcatatgccttattgatcact
ctttacaggggtacaacaaatgggaatgaatacatgcgtaagcaggagcttattgatgca
gctgaagcaagtggtctttctagggtggcgattgcgccagagaagggtaaagggaaacct
agtcaatttggaagctcttcgagggattggtacagtggatggagctgcatgaagacattg
atatcaaggggattggtggtgaaatctaattgcccagcaaaatacatgcttacagaggag
gggcagcaagtggcacgtgaatgtcttatgagatctggactgttaagttcttcaaagaac
tttgataacacaaaaggatcctctattctcgaatcatgtgatatatctaatcacagtgct
aattatcttgattcagatgtagaagtgacttcaccatctgttagtcagagtactaagcac
aaatcaattgatgtgccccttgaatcacttgagaggtttatgcgcatgggttactctaag
catcaagttattaattcctttaaagaagtttcaaaggataacccaaacaaggatatctca
tcactttggccagcagttttatgtcgtctacgcgaagatcttgtttatggtcaagtagaa
gcaattggaagagaaaataggtcaatgggttcttctcttgaggggagtgagccaaagaat
gttgttaatgttaatggggagagatcttttagctcgagagcttgctcatcatctaatcct
tccatcatcgaatcccgtagagatagtgtcaaaggaaatacaaacatcttgagtatgcca
cctttgagctttggtgaaaaatttgaagattgttataacgtagtcctgatattggacgat
cgagaacagtttgccaagcacagttcacggtctaggagaatgattgagaatatctgtagc
caattcaagattcagattgagattaggaggctacctgttggtgatggaatctgggtagcc
cgccataaacatcttgataatgaatatgttcttgattttattgttgagaggaaagatgtt
gaggatttgcggtgctcaatcagggacaatcgctacagagaccagaaattaaaacttttg
agatgtggtcttaaaagaatgatatatcttgtggaaggtgatcccaattcatctgaagcg
gcagaaagcatcaaaacagcttgctttacaacagaaattttagagggatttgatgtgcaa
agaaccagtggcttgtcagatacactaaagaagtatggttatcttactcatgcaattaca
caatactacatattacaggcatctgatgatcgtgttagtcattctgatgtctgtcctcgt
ctcgatcaatttataaaaaaatgccaagaattggataagatgacggttagtgatgttttt
gcacttcagctcatgcaggtcccacaggttacggaggaggttgctgttgctgttttggat
ttgtaccccactcttctatcacttgtccgagcatattctcttttagtgagttcgatcttc
tattttataaagctccctattctccctttgatttcgtgcttcctgggaattgggataggt
ttcatacatatttgtgaaaggaataacgtccccatcatatcctgggataacattcttcag
gttaaccaatttacctattattga
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