KEGG   Cucumis sativus (cucumber): 101219411
Entry
101219411         CDS       T02486                                 
Name
(RefSeq) protein RDM16 isoform X1
  KO
K12843  U4/U6 small nuclear ribonucleoprotein PRP3
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101219411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csv03041]
    101219411
Spliceosome [BR:csv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    101219411
SSDB
Motif
Pfam: PRP3 Prp3_C
Other DBs
NCBI-GeneID: 101219411
NCBI-ProteinID: XP_004143591
UniProt: A0A0A0KLQ4
LinkDB
Position
5:complement(4350996..4356777)
AA seq 923 aa
MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR
ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL
REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRPNKRKERGGSEDRFDGGEKRARAS
EVGNEVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEEDNGGNVDEKHG
KVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLHPSHSLPIKVS
SISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKL
KRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVVSSSSTLPSAA
NALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVPQK
PTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILKPELDVDPDSN
PHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKERREKQAQLAK
AKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGFVADDKLRKDK
ITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPK
PKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKL
FDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVLVVEGGSKSIK
RYAKLMLRRINWAASVKEEEEEENDDKPLNKCSLVWQGSVAKSSFNRFSIQECMTEAAAR
KIFADAGVGHYWDFAINFSDDQL
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggatagggtttccgagaaggagaaatcaagcaagcgttctagagaagaacgcgatcga
gaccacaagcatcgaagtcgggataccgaggataagcatttatccaaggatgaaaagcat
cgtgaatccgatcgccaccatcgccggcgacaccatcgatcggaccgtgattcgaagcgt
gagcgttcgcatgagcctcgtgaacacaaacatcggcgtgatatgtctcctgatgagcgt
gaaagctcccaagaccgcgattttaagcgggaaaggtcttatgaacttagggaggagaga
gaaagaagtagggatagggattcgtctaagcgagagaagtcgaatgaaccgagaggattg
agagaaggcagcgaagagcgtggcaagctgcgtgaggtgaggcgcgaggaatcagacaat
gagcatgaacgggaagggtcgttcgagcctattcaaaattccgtacgtccaaacaagagg
aaggagaggggaggaagtgaggatagatttgatggtggggagaagagggccagggcttcg
gaagttgggaatgaagtgaatggagctgagatggatgagaaaaaggagcggaggagattt
gctgacggtgagaaagacgaaggagcaaacttgagtggtcggggaaggagggacaggaag
cggtttgaggatcgagggaaggaagaagataatggtggaaatgttgatgagaagcatggg
aaagtgaatgaatacaagtccaaaggagacgttggggatgggaaagttcagtttggaggc
accaccgatgaaaaaaggtcactggggaatggatctatggtggaacctaccgatatgcca
tcagcaagtgtgccccagaatttgttacatcctagtcattcccttcctatcaaggtatct
tcaatttctaccacaaatgaaaataggggagttagtattaccagatctcatgaggttcat
ggaaaatctagtacagatgggacatcctcaactgctgggaaaagtggaaatctctctctt
gatgctttagcaaaagctaagaaagctttacagatgcagaaagaattggcggagaagttg
aagagaattcccctgatgaagaaggttgggggttcaagttctgctaatagctcagttgtg
aaattggaggagaaagctaaacctcccagtggtatattgggtccactgtcaactaccaat
gatgctacaactctttcaactggggtagtgtctagttcgtcgacattaccttctgctgcc
aatgctcttgatggtggtattaatgttccggctggccttacctctataccccatattgaa
gctgttaagcgtgctcaggagctcgctgccaggatgggatttcgccaggatccagagttt
gctcctcttataaatttgtttccagggaatgtagcaactgacgttgctgttccacagaaa
ccaaccaaggcccctgttcttcgtcttgatgcacttggtagggaaattgacgaacaagga
aatgtagtcaatataaccaaacccagcaaccttagcactcttaaggttaacatcaacaaa
caaaaaaaggatgcatttcagattcttaaacctgaacttgatgtggatccagattcaaac
cctcattttgatgagagaatgggtataaataaaactaaactgctgaggccaaagagaatg
agtttccagttcgttgaggaagggaaatggtcgaaggaggctgaaaccttaaaattgagg
agtaaatttggagaggcacaagcgaaagaacgaagagaaaagcaggcacagttggccaag
gcaaaggctgcacctgatataaatccaaatttgatcgaggtttcagagagagtggtgaag
gaaaaaacaaaagacccaattcctgaaattgagtggtgggatgtcccgcttttgcaatcc
ggtgcgtacaaggatttgggagatggttttgtggccgatgacaaattgagaaaggacaag
attaccatatacgtggagcatcctcgtcctattgaacctcctgccgagccagctctcccc
cctcctcaacccctaaagctaacaaagaaggagcagaagaaactccgtacacagcgtcgt
ctagcaaaggagaaagatagacaggaaatgattagacaaggcctgatagaaccacctaaa
ccgaaagttaaaatgagcaatttaatgaaagttcttggctcagaagcaacccaagatcct
actaaacttgagaaagagattcgtgctgcagctgctgagagggagcaagctcacatagat
cgaaatattgcacgaaaactcacccctgcagagcgccgtgagaagaaagaacgtaaacta
tttgacgattcaaattcactcgagacatttgtgtctgtttacaagatcaacgatctatca
cacccccaggcccggtttaaagttgacgttaatgctagagagaaccgattgacagggtgt
gctgtgatatgcgatggcatcagtgttctggtcgttgaagggggtagcaagtccatcaag
aggtacgcaaaacttatgctcaggcgtataaattgggctgcttctgtgaaagaggaggaa
gaggaggaaaatgacgataaaccccttaacaaatgttccttggtatggcaaggaagtgtt
gccaaatctagcttcaatagattttccatccaggagtgcatgactgaggcagctgctagg
aagattttcgctgatgccggtgtcggtcattactgggattttgctattaacttctccgac
gatcaattataa

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