Cucumis sativus (cucumber): 101219502
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Entry
101219502 CDS
T02486
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101219502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101219502
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101219502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101219502
NCBI-ProteinID:
XP_031741374
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Position
5:24396089..24411565
Genome browser
AA seq
1663 aa
AA seq
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MASVDSGPSSLIPLEDAGEGEQIVRNDLYFQKIGKPVPVKLGDSIFDPESPPSQPLALSE
SSGLIFVAHLSGFFVVRIKDVIASAEEIKNGGTGSSVQDLSIVDVSIGKVHILAVSTDNS
VLAAVVAGDVHIFSVQSLLDKAEKPYSSCSITDSSFIKDFKWTRKLENTYLVLSKHGQLY
QGSANGPLTHVMHDIDAVECSVKGKFIAVAKKDTLTIFSHKFKERLSMSLLPSLGNGETD
TDFTVKVDCIKWVRADCIIIGCFQVTATGDEEDYLVQVIRSKDGKITDVSSNKVLLSFCD
IHSGFTRDILPGESGPCLLLSYLDTCKLAIVANRLYVEDHIALLGLLLEVENEVAVVNID
RNTSLPKIELQANGDDNLVMGLCIDRVSLLGKVIVKVGFEDMREVSPYCILVCLTLEGEL
IMFQFSSVNETEAPHETVSACDDEEDDITVPTDDRSESKESREANIDHRMQVTEKIAISS
EIPREKGKTSNDIKSSRNDQSLVYNIDESAIVSPEGNTKSQKVDSFIYSQSLKSSAPERP
PHYEIGNFDKPVLKFTGLGSASISGKSEDVPSQPFPNVKESTKRLGSTGLMAASELSSEK
AMSFKKIDPVPSVFTSNSLQSSNTENYGPSFGTANAFTGFAGKPFQPKDVPSTLTQSGRQ
ATGGAGKIESLPVIRSSQISLQDKFSSGKISNEKHDGSERYYSNSPLAKPMKEMCEGLDT
LLESIEESGGFMDACTAFQKSSVEALELGLASLSDGCQIWRSTMNERSQEVQNLFDKMVQ
VLSKKTYIEGIVMQSSDSKYWEQWDRQKLSSELELKRQHILKMNQNITNQLIELERHFNG
LELNKFGGNEESQVSERALQRKFGSSRHSHSVHSLNNIMGSQLATAQLLSESLSKQLAAL
NMESPSLKRQSATKELFESIGLTYDASFSSPNVNKIAETSSKKLLLSSDSFSSKGTSRRK
QQSGTKNSEAETGRRRRDSLDRNLASVDPPKTTVKRMLLQGIPSSEEKQFCSRTPEGAAT
VARPASRITSSISSSSKNAGHDSENPETPFMWNSPLQPSNTSRQKSLPLQKINVTPPSPP
PVFQSSHDMLKKKNNEAHSVTSENKFTDVACPEKSKASDFFSATRSDSVQKSNINVDQKS
SIFTISSKQMPTPIDSIATSNVDNQKTANVKERHTTTSPFFGSANKPESPFVGSMPSLVP
TVDGSRKTEEKKSVTTISQSVSAPAPLNTSSSASTLFSGFAVSKALPSSAAVIDLNQPPS
TSTQLNFSSPVVSSSNSLFQAPKIVPTSPTLSSLNPTLESSKTELSVPKSNDDAEEQILS
SKPGSHELKFQPSITPADKNHVEPTSKTQTVFKDVGGQDSNVVGNAQPQQPSVAFASIPS
PNLTSKIFANSRNETSNAVVTQDDDMDEEAPETNNNVEFNLSSLGGFGNSSTPISGGPKP
NPFGGPFGNVNAASMTSSFNMASPPSGELFRPASFSFQSPLASQAASQPTNSVAFSGAFG
SAVPTQPPSQGGFGQPSQIGVGQQALGNVLGSFGQSRQLGPTVHGTGSGSPGGFSGGFTN
AKPVGVGGFAGVGSGGGGGFGGVGGFAGAASTGGGFAGASSTAGGFAGAAGGGFGGTAGG
FGAFGSQQVSGGFSAFGAAAAAAAAGGAGVTGKPPELFTQIRK
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgttgattcgggaccttcatccttgattccactggaggacgccggcgaagga
gagcaaattgtaaggaacgatctctacttccaaaagatcggcaaacctgttcccgtcaag
ctcggcgactccatttttgaccccgaaagtcctccctctcaaccccttgctctttcagag
agttccggtctcatcttcgttgctcatttgtctggtttttttgtggtgagaatcaaggat
gtaattgcttcggccgaggagataaaaaatgggggaacgggttcttctgtccaggactta
agcattgtggacgtttccattggaaaagttcacattctagcagtttccactgacaactca
gttcttgctgccgtcgtagctggtgatgttcatattttttcagtccagtcgctgcttgat
aaggcagaaaaaccctattcttcttgttcaataactgattccagttttattaaagacttc
aaatggaccagaaagttggaaaatacttatctggttctttcaaagcacggacagttatat
caaggatcggcgaatgggcctcttacacatgtaatgcacgatattgatgctgttgaatgc
agtgtgaaagggaaattcattgctgtggctaaaaaggacactcttaccattttctcacac
aaattcaaagaacgactatccatgtcactcttgccgagtttagggaatggtgaaactgat
acagactttacagtgaaggttgactgtatcaagtgggtccgtgctgattgtatcatcata
ggatgctttcaagtgaccgcaacaggtgatgaagaagattaccttgtccaagttatcaga
agtaaagatggaaaaatcactgatgtttcttcaaacaaagttttgttatcattctgtgat
atacattcaggtttcactcgtgacattttgcctggtgaaagtgggccttgtttattgttg
agctatttggatacatgcaagcttgcaattgttgcaaataggctctatgtggaagatcat
attgcattgcttggtttgttgctagaggttgagaatgaagttgcagttgttaatattgat
aggaatacctctctcccgaagattgagcttcaagcgaatggagatgataatttggttatg
gggctgtgtattgatcgagtttctcttctggggaaggtgatagttaaggttggatttgaa
gatatgagagaagtctctccatattgcattctcgtgtgtcttactttagagggagagctc
attatgtttcaattttctagtgtcaacgaaactgaagctccacatgagactgtttctgct
tgtgatgatgaggaagatgatataacagtgcccactgatgatcgttctgaatcaaaggag
tctagagaagcaaacatagatcataggatgcaagttacggaaaaaatcgcaatcagtagt
gagattcctagggaaaagggtaaaacttcaaatgacattaagtcttctaggaatgatcaa
agtctagtatataacatagatgagagtgcaattgttagcccagagggtaatactaaaagt
cagaaagtggattctttcatttattcacaatcattgaagtcttctgccccggagagacca
cctcactatgagattgggaactttgataagccagttctaaaatttactggtctcgggtct
gcttctatttcaggaaagtctgaggatgtgcctagccagccctttcccaatgtaaaagaa
tcaacaaaaagattggggtcaactggcttgatggctgcttctgagttatccagtgagaaa
gcaatgtcttttaaaaaaattgatccagtaccttcagtctttacttcaaattctcttcaa
agcagcaacactgagaattatggaccaagttttggtacagcaaatgctttcacaggtttt
gctggaaaaccttttcaaccaaaggatgttccaagtacattaacacaaagtgggagacaa
gcaacgggaggtgctggtaaaattgaatctttaccagtgatacgtagctcacaaatatca
ttgcaagataagttctcgtcagggaaaatttctaatgagaaacatgatggttcagagcga
tattacagcaattcccccctggcaaaaccaatgaaggaaatgtgcgaagggttggacaca
cttctcgaatctattgaagagtcgggtgggttcatggatgcctgcactgctttccagaaa
agctccgttgaagctttggaacttggcttagccagtctttcagatggatgccaaatatgg
aggagcacaatgaatgagcgttcgcaggaggtacaaaatctctttgacaaaatggttcaa
gttttgtcaaagaagacatacattgaaggtattgtgatgcaatcttctgacagcaagtat
tgggaacaatgggatcgtcaaaagttaagttctgaattagagctgaagagacaacatatc
ttaaagatgaatcagaatataaccaaccagttaattgagttagaaagacattttaatggt
cttgagctgaataagtttggtggaaatgaggaaagtcaagtaagtgaaagagctcttcaa
aggaaatttggttcgtcaaggcatagtcattcagtacatagtttgaataacattatgggg
tctcaattagcaacagctcaacttctttctgaaagtctatcaaaacaattggctgcactc
aatatggaatcaccctctttgaaaaggcagagtgccacgaaggaattgtttgagagtatt
ggacttacttatgatgcttctttcagttctccaaatgtgaacaaaattgcagaaacttct
agcaagaagcttttactttcttctgattctttttcaagtaaaggtacatcgagaagaaaa
caacagagtggaactaaaaattctgaagcagagactgggagaaggagaagagattcactt
gacaggaacttggctagtgttgaccctccaaaaacaactgtcaagaggatgcttttgcaa
ggaattccttcctctgaggagaaacaattttgttctcgcacacctgaaggagctgcaaca
gttgcacggcctgctagtcgcataacatcatctatttcatcgtcatccaaaaatgcagga
catgactctgagaacccggagactccttttatgtggaatagccctttacaaccatctaat
acctctagacagaaatctctacctttgcaaaaaattaatgtgacaccaccatctccacct
ccagtattccaatcatcacatgatatgctgaaaaaaaaaaataatgaagctcacagtgtg
acttcagaaaacaaatttacagacgtggcgtgtcctgaaaagtcaaaagcttctgatttc
ttctcagccactaggagcgactctgtccagaaatctaatataaacgttgatcagaaatca
tccatctttacgatatcatctaagcagatgcccacaccgatagattctattgctacctct
aatgtggacaatcagaagactgctaacgtaaaggagaggcatacaactacaagtccattt
tttggatctgcaaataagcccgaatctccatttgttggttcgatgccttctctggttcct
actgttgatggatcaagaaagactgaagaaaaaaaatcagtgacaacaatttcacaatca
gtttcagcaccggctccgttaaatacttcttcaagtgcatcgactttattttcaggattt
gctgtaagcaaagctcttccaagttctgctgctgttatagatctcaatcaacctccgtca
acatcaacccaattgaacttctcctctccggttgtttctagttctaattccctatttcag
gcacctaagattgtaccaacatcacccactctatcttctttgaatcctacattggagtcc
tcgaaaacagagctatcggttccgaaatcaaatgatgatgctgaagagcaaatactatct
tcgaagcctgggtctcatgaactgaaatttcaaccttctataacacctgccgataaaaat
catgtagagccgacttctaaaacccagactgttttcaaagatgtgggaggacaggattca
aatgtagtagggaatgctcaaccacaacagccatctgttgcttttgcttcaataccttca
ccaaacttaacttctaagatttttgcaaatagtagaaatgaaacttcaaatgcagtggtt
actcaggacgatgatatggacgaggaggccccagagacgaataacaatgttgagtttaat
ttgagcagcttgggaggatttggaaatagctctacccctatatcaggcggtcctaaacca
aatccatttggtggtccatttggtaatgtgaatgcagcctcaatgacctcttcctttaat
atggcatctcctccaagtggagagctgttccggcctgcatcgtttagcttccaatctcca
ttggcttcacaagcagcatcacaacccacaaattctgttgcattctctggtgcctttggc
tctgcagtgcctactcaaccgccttcgcaaggtgggttcggtcagccttctcagattgga
gtaggacagcaagcacttggtaatgttcttggttcatttggacaatcaagacagcttggt
cctactgtccatggaactggttcaggatcacctgggggttttagtggtggctttacgaat
gcaaaacctgttggagttggaggttttgcaggtgtcggttcaggaggtggcggcggtttt
ggaggtgttggtggttttgctggtgcagcctcaaccggtggaggatttgccggtgcttcc
tctacggcaggaggttttgcaggtgctgcaggtggaggctttggaggtactgcaggtgga
tttggggcgtttggcagccagcaagtaagcggcggtttctctgcttttggtgctgctgct
gctgctgctgctgctggtggagccggagtaactggaaaacctcctgagcttttcacccaa
attagaaagtag
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