Entry |
|
Name |
(RefSeq) tRNA pseudouridine synthase A
|
KO |
|
Organism |
csv Cucumis sativus (cucumber)
|
Brite |
KEGG Orthology (KO) [BR:csv00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:csv03016]
101219581
Enzymes [BR:csv01000]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
101219581
Transfer RNA biogenesis [BR:csv03016]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101219581
Prokaryotic type
101219581
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
4:complement(25990151..25992087)
|
AA seq |
519 aa
MEEEPPTETRRSPPQPLIEEPQPKKLKMSSTTTTSDDEDVNSNSAAPKKQRYKRRKVAIF
FAYCGVGYQGMQKNPGAKTIEADLEEALYLAGAVPEQDRGLSKRYDWARSARTDKGVSAV
GQVVSGRFYIDPPGFVDRLNSNLSPQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALD
PNCHRDRESVKASLGSDNELVKCLECSERGRKVEGLIGKRNFEVKTAITESDISSNTVNA
IEVSDVQANGVLEDSATTSDSNKQTSVLVENTATELNVGSEGTAKSESSEMSGLGSDSEI
VVSKESVNGKEKSSGSFKYGEEEKARFNRILKHYVGTHNFHNFTTRTKAEDPAARRFIVS
FDASAIVVVEGIEFVKCEVVGQSFMLHQIRKMMGLAVAIMRNCAPESLIEKALQKDVNIN
VPTAPEVGLYLDECLFTSYNQKWKDTHEEVSMKAYEEAAEDFKMKQIYSHIASTEHKDGA
VALWLHSLNHRNYPDLRVIDEVAKIAKNASLDMETQAET |
NT seq |
1560 nt +upstreamnt +downstreamnt
atggaagaagaaccgccaactgaaaccagaaggtcaccgccacaaccgttgatcgaagaa
ccccaaccgaagaagctcaaaatgtcatctacaaccaccacatccgacgacgaagatgtt
aattccaactctgccgcgcccaagaaacaaaggtacaagcgccgcaaggttgccattttt
tttgcctactgtggcgtcggttaccaagggatgcagaagaaccctggcgctaaaaccatt
gaagctgaccttgaagaagccttatatctcgccggagccgtacctgagcaggaccgaggg
ctctcgaagcgctatgattgggcccgctcggctcgcactgataagggcgtgagcgccgtg
ggtcaggtcgtttctggtcgcttttacatcgatccaccaggttttgttgatcgtctcaat
tcgaatctttcgcctcagattcgaattttcgggtacaagcgcgtcacagcgtcattcaat
gcgaaaaagttctgcgatcggagaaggtatgtatacctaatccctgtcttcgctctcgat
cccaattgccatcgtgatagagaaagtgtgaaagctagtttagggtctgataacgagctt
gtgaagtgcttagagtgctctgaacgaggacgcaaggtcgaaggcttgataggcaagcgc
aatttcgaagtaaaaactgcgataactgagtcagacatttcgtcgaacactgttaacgcc
attgaagtttctgatgttcaagcaaatggggttttggaggacagtgccacgacctctgat
tctaacaaacaaactagcgttttagtagaaaacactgctactgaactcaatgttggaagc
gaaggtactgcaaaaagtgaaagcagtgaaatgtctggattagggagtgattcagagatt
gttgtaagcaaagagagcgttaatgggaaagagaaatcttcagggagcttcaagtacggc
gaggaggagaaggctaggttcaataggattttgaaacattatgtgggaactcataacttc
cacaattttactactagaacaaaagcagaggatcctgctgctcgtcgattcattgtttcg
tttgatgcttctgcaatcgtcgtggttgaaggcattgaatttgtgaaatgtgaagttgta
gggcagagtttcatgcttcatcagatccgtaagatgatgggtcttgctgtggcaatcatg
aggaactgtgctccagagtcattgatcgagaaagctttgcaaaaggatgtaaatatcaat
gtgcccactgcacctgaggttgggctgtacctagatgagtgcctattcacatcatataat
caaaagtggaaagacactcatgaagaggtatccatgaaagcatacgaagaggcagcagaa
gatttcaaaatgaaacaaatatattctcacattgcttccacagagcacaaagatggagcc
gtggccttatggttgcattctctaaatcatcgaaattatccagatttacgtgtcattgat
gaagttgctaaaattgctaagaacgcaagtcttgacatggagacgcaagctgaaacttaa |