Cucumis sativus (cucumber): 101219671
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Entry
101219671 CDS
T02486
Name
(RefSeq) LEC14B homolog isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
csv
Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101219671
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101219671
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
WDR54
Beta-prop_SCAP
WDR90_beta-prop_4th
PQQ_3
Beta-prop_IFT122_1st
Kelch_1
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
101219671
NCBI-ProteinID:
XP_004148877
UniProt:
A0A0A0K5S4
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Position
7:17925271..17933656
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AA seq
488 aa
AA seq
DB search
MYGIPSWAIIGDMGYALSRLEIGSDCDGDMSTSASGEAQVSNKPLNNLDDEIAQLTRMKS
GPSAHLSQVLPGKPEVYISPVKMLAGRECNYSGKGRFSAGDCCHVLSRYLPVNGPWLVDQ
MTSRAYVSQFSSDGSLFVAGFQGSHIRIYNVDSGWKVQKNILAKSLRWTITDTSLSPDQR
YLVYASMSPIIHIVNVTSAETESLANVTEIHEGLDFCAHGDGRDSFGIFSVKFSTDGREL
VAGSSDDSIYVYDLETNKLSLRILAHRSDVNTVCFADETGHLVYSGSDDTFCKVWDRRCF
ISKGKAAGILEGHVEGITFIDSRGDGRYLISNGKDQTIKLWDIRKMSNNATHYNRPRNYD
WDYRWMDYPPHAKNLMHPRDRSLATYKGHSVLRTLIRCYFSPEYSTGQKYIYTGSHNSCV
YIYDLLTGVLVATLKHHKSPVRDCSWHPQYPMLVSSSWDGDVVKWEFPGSGEAPTPPNKK
RVRRRHFY
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtatggtattccaagctgggccatcattggtgacatgggttatgctttgagtaggcta
gaaattggttctgactgtgatggtgacatgagtaccagtgcatcgggtgaagctcaagtg
tcgaataaacctttgaataatttagatgatgaaattgcacagctcactagaatgaaatca
ggaccaagtgcacatttaagtcaagtactgcctgggaagccggaggtatatatttcccct
gtaaaaatgttggcaggtcgggagtgtaactactcaggaaaggggaggttctcagctgga
gattgctgtcacgttttaagcagatatttgcctgttaatggtccatggcttgtggatcaa
atgactagccgagcctatgtctcgcagttttcatcagacggttccctatttgttgcagga
tttcaggggagtcacattagaatatataatgtggatagtgggtggaaagttcaaaagaac
attcttgcaaaaagtttgcggtggacgatcacagatacgtcactttctcctgaccagcgt
taccttgtctatgccagcatgtcaccgatcatccacattgttaatgtgacatctgctgaa
acggagtctcttgcaaatgttacggagattcatgagggattggatttctgtgcacatggt
gatggaagagattcttttggaatattctctgtgaaattttcaacagatggacgagaactt
gttgctggaagtagcgacgattcaatatatgtctatgatcttgaaactaataagctttcg
cttcgaattttggctcaccgatctgatgtgaatactgtatgttttgctgatgaaactggc
catctggtttattccggaagtgatgatactttctgtaaggtgtgggacagacgctgcttt
atatctaaagggaaggctgcagggattctagaaggacacgtagaaggtatcacattcatc
gatagtcgtggggatggtcgatatttaatttccaatggtaaagaccagaccatcaaactt
tgggatatcagaaagatgtccaacaatgctactcactacaataggcctagaaattatgat
tgggactacaggtggatggattatccaccccatgcaaaaaatttgatgcatccacgtgat
cgatccctcgctacatacaagggtcactcagtcctgcgaacacttattcgttgttatttc
tccccggaatatagcaccggtcagaagtacatctacactgggtctcacaattcttgtgtt
tatatctatgatttgttgactggagttctagttgcaacactcaagcatcacaaatcacct
gtaagagactgtagctggcacccacaatatccaatgcttgtaagctcttcatgggatggg
gatgtagttaaatgggaatttccaggcagtggtgaagcaccgactcctccgaacaagaag
agggtccgtagacgacatttctattga
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integrated database retrieval system