Cucumis sativus (cucumber): 101219724
Help
Entry
101219724 CDS
T02486
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101219724
Enzymes [BR:
csv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101219724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101219724
NCBI-ProteinID:
XP_004142093
UniProt:
A0A0A0KZG2
LinkDB
All DBs
Position
4:14404341..14407859
Genome browser
AA seq
376 aa
AA seq
DB search
MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA
LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL
SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG
TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSSWTVQPATDALKHILQHC
TGCQNIPRPADQPLVP
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacgcccatggccaccgcaagcatttcaaccatggcgtaaatacctctccaacc
actaacgctccttctccctccaataaatactcttcatctgaacccacttctcgaaatccc
tcctcctccacgaatatgcagtccttgccctacccccatgttgattccagccttcgagcc
cttgccgctcaggctgagggctttggtcgctctgccattggtggtctccatggttctgtt
tattgtgttactaatttagcagatgatggtccgggatcacttaggttcggatgtcgtatg
aaagagcctctttggattatctttgaagtttcgggcacaattgacttgtcttcgtatttg
agtgtgtcatcgtataagactgtagatggtcgtggtcaaaggataaaacttacaggaaag
gggttgaggctgaaggaatgtgagcatgtgattatttgtaatttggagtttgaaggtggt
agaggtcatgatgttgatggaattcaaattaagccgaactcaaagcacatatggatagac
cgttgcagcctccgagactatgatgatgggttgattgatatcacccgagcaagcacggat
atcactatttctaggtgttacttctcacatcatgacaagacaatgctcattggagcagat
ccttctcacattggtgaccgatgtatccgtgtcactatccaccattgttttttcgatggt
acacgtcaacggcatccacgtgttagatatgctcaagtgcatctatacaataattacacc
agaaactggggtatctatgctgtctgtgctagtgtagaatcaaagatatactctcagtgc
aacatatacgaagcaggagagaaaaaggtggcgtttaaatatctaactgaaaaggcaaca
gacaaggaaaagccgtcaagtggttccatatggtctgatggagacttatttgtaaaggac
actcaaagtgggctattggctccaactgctgaacacgacttgtttcatccttcacaccat
tactctagttggacagtgcaacctgcaacagatgctcttaaacatattctccaacattgt
actggatgtcaaaacatcccaagacccgctgatcagcctctggtaccttag
DBGET
integrated database retrieval system
