Cucumis sativus (cucumber): 101219784
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Entry
101219784 CDS
T02486
Name
(RefSeq) BRCT domain-containing protein At4g02110 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101219784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csv03032
]
101219784
03400 DNA repair and recombination proteins [BR:
csv03400
]
101219784
DNA replication proteins [BR:
csv03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101219784
DNA repair and recombination proteins [BR:
csv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101219784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
Motif
Other DBs
NCBI-GeneID:
101219784
NCBI-ProteinID:
XP_004136156
LinkDB
All DBs
Position
7:18883310..18890279
Genome browser
AA seq
1372 aa
AA seq
DB search
MEIDYSRQPFLGVHFVLFGFNIVDEKQVRSKLIDGGGVDVGQYGPSCSHVIVDKNKIVYD
DPVCVAARNDGKLLVTGLWVDHRYDSGLLADATSVLYRPLRELNGIPGAKSLVMCLTGYQ
RQDRDDVMTMVGLIGAQFSKPLVANKVTHLICYKFEGDKYELAKRLRTIKLVNHRWLEDS
LREWMLLPESNYNISGYDMEMLEAEAKDSEEESNSGITKHFAMRNTKSPDKMKFGLHSTS
VISNTVPASKTLDERTSFSDTKSMLTVPTTNTEFIPSGKFDKYDEVRGPICQEVDVFSTP
WDSVPFNMHTTTSESEKQKVKNEAVTSPSNAARSPQLCATSYSRRTPLKSPLPLFSGERL
ERADASCKIATGEIKDAIGVDVSLEKMEQVTYATFSGHEQNSSKGTDLFGTGDSNAGLPL
KKNSDVSYDVPRSHSMSENTKSCTLNNPSTDEKVLGLEMSRVSLNHDDSDKRRAKTLQHS
RGSTDTSSPIKKPLICDLPFGNSVRSPTEDVAGGSLKTPRTPFQISGKDLSPDKPNKPIH
DCEISGDLVGKTKETDRQQNGVLAAPESDSGTKVTKTKSASPSSLNSSVLQNNNLQSKPQ
RIKMFAKKSLGSRPKLGSGSHRGSILSSKTTSLNDSVSSSCGNGEKLFSSSPQDVSIGVK
KVVKTADKGDFSHKYEVMDEDDKTSDPENKEDFEHRMMDTENFKEVPQISDGEKVAKEIA
SGVKRNSSASVLNDTIPSGTLKEVIERKAPLSIGNVQLDELRLEDEKSKLNVGDRGPTEE
KMLINSSKAKSKQGKVCKAPAREKNGKTGKKPQLVAAGLNTEVHTIHDYISEKVNVPCEA
MDEDDKTFDVENKEADFEQQMMDMENFNGVPLMIDDDKLEKEIASGVKCNNSSRVLDDTI
PSGTLEEVIEPKAPVSIGNVQLDELSLEDEQSKLNVGDRSPTEEKMLKNSKEKSKQGKVC
KAPSRKKNVKTGKKPQLVAAGLNTEVHTIPDHKSEKENVPCDVGDKNSHIVKHFDKITVK
SNTKQRKVTKKSSEISANSSMEIEEVLSEVKPEPMCFILSGHRLERKEFQKVIKHLRGRV
CRDSHQWSYQATHFIAPDPVRRTEKFFSAAASGRWILKSDYLTDSSQAGKLLDVEPYEWY
KKGLTEDGAINLEAPRKWRLLREKTGHGAFYGMRIIIYGECIAPPLDTLKRAVKAGDGTI
LATSPPYTKFLKSGVDFAVVGPGMPRADTWVQEFLNNEIPCVAADYLVEYVCKPGYPLDK
HVLYNTHAWAERSFSNLQSKAEEVAEDLSSQDDCSDNDIACQECGSRDRGEVMLICGNED
GSSGCGIGMHTDCCNPPLLDIPEGDWFCSDCINSRNSNSSNKRKKGVSVKRK
NT seq
4119 nt
NT seq
+upstream
nt +downstream
nt
atggaaattgattattcccgccaaccgttcctaggtgttcactttgttctctttgggttc
aatattgttgatgagaaacaggttcggtctaagctaattgatggcggaggggttgatgtt
ggtcagtatggaccgagttgtagtcatgtgatcgtggacaagaataagattgtttatgac
gatccggtttgtgttgctgctcgaaatgatggcaagttgcttgtcacggggttatgggtt
gatcatagatatgattctgggttgcttgctgatgctacttcggtattgtacagaccgtta
agggaactgaatggaatcccaggggctaaaagtttggtaatgtgcttgactgggtaccag
cgacaggatagagatgatgttatgacaatggttggcttgataggtgctcaattctctaag
ccattggtggcaaacaaggttacccacctcatatgttacaaatttgaaggggacaaatat
gagcttgctaaaagactgaggaccatcaagcttgtcaatcatcgttggctggaagacagc
ttgagagaatggatgttacttccagaatctaattacaacataagtggatatgacatggag
atgcttgaagctgaggctaaggattctgaagaggaatctaacagcggcatcaccaaacat
tttgcaatgagaaacaccaagagtcctgacaaaatgaaatttggtttacattcaaccagt
gtaatatctaatacagtgccagcttcaaagacattggatgagcgcacaagcttttctgat
actaagagcatgttgacagttcctactaccaacactgaatttattccttctggaaagttt
gataagtatgatgaggtcagaggaccaatttgtcaggaagttgatgtttttagtactcct
tgggattccgtgccatttaacatgcatacgacaacttctgaatctgagaagcagaaggtg
aaaaatgaggcggtgacaagtccatcaaatgcagcgaggtccccgcaactgtgtgctacc
agttactctaggagaaccccattgaagtcgccacttccactgttttctggagaaagattg
gaaagagctgatgcctcttgtaaaattgcaacaggtgaaataaaagatgctattggtgtt
gatgtgtcgttagaaaagatggagcaagtaacttatgctactttctctggccatgaacaa
aattcttcgaagggaactgatttatttggtacaggagattcaaatgctggattgccactg
aaaaaaaattcagatgtatcttatgacgtccctcgatctcattcgatgagtgagaacaca
aaatcatgcaccttgaataacccctccacagatgaaaaagttttaggattggaaatgagt
cgtgtttctttaaaccatgatgattctgataagcgtcgtgctaagaccttgcagcatagt
aggggcagtactgacacctctagtcctattaagaaaccattgatatgtgacctacctttc
ggcaacagtgttcgctctccaactgaagatgttgctggaggcagcttgaagactcctcga
actcccttccagatatcaggaaaagacctctcacctgacaagcccaacaagccaattcat
gattgtgaaatttctggagatttggttggaaaaactaaagaaacagataggcagcagaat
ggtgttttggctgcacctgaaagtgatagtggtaccaaggttacgaaaacgaaatcagcc
tcgcccagtagtttgaattcttctgttcttcaaaataataatttgcaatccaaaccacaa
agaatcaagatgtttgccaaaaagagcttgggttcgagaccaaagttgggcagtggcagt
cacaggggttctattctctcgagtaaaaccacttccttgaacgattcagtttcttcatct
tgtgggaatggtgaaaaactctttagctcatcacctcaggatgtcagtattggagtgaaa
aaggttgtgaagacagcagataagggggacttttctcataaatatgaagtcatggatgaa
gatgacaaaacttctgatccagaaaataaagaagattttgagcatcgaatgatggatacg
gaaaattttaaggaagttccacaaataagtgatggtgaaaaggttgcaaaagagattgca
tctggagtgaaacgtaacagtagtgctagtgtgcttaatgatacgattccttcaggtacg
ctaaaagaagtgattgaacgcaaagcacccctttccatcggaaatgtacagctggatgaa
ttaagactagaagatgagaaatcaaaattgaatgtgggggatagaggtccaacagaggaa
aaaatgttgataaattcttctaaagcgaaatcaaaacaaggcaaggtttgtaaggcacct
gcccgtgagaaaaatgggaagactgggaagaaacctcagttggttgctgcagggcttaat
actgaagtccatacaatacacgattatatttcagagaaggtaaatgtaccatgcgaagcc
atggatgaagatgacaaaacctttgatgtagaaaataaagaagcagattttgagcagcaa
atgatggatatggagaattttaatggagttccgctgatgattgatgatgataagctagag
aaagagattgcatctggagtgaaatgtaacaatagctctagagtgcttgatgatacgatt
ccttcaggtacactggaagaagtgattgagcccaaagctccagtttccatcggaaatgta
cagctggatgaattaagtctagaagatgagcaatcaaaattgaatgtgggggatagaagt
ccaacggaggaaaaaatgttgaaaaactctaaagaaaaatctaaacaaggtaaggtttgt
aaagcaccttcccgtaagaaaaatgtgaagactgggaagaaacctcagttggttgctgca
gggcttaatactgaagtccatacaatacccgatcataagtcagagaaggaaaatgtacca
tgtgatgttggtgacaaaaatagtcatattgtcaagcattttgacaaaattacagttaag
tctaatacaaagcaaagaaaggtcactaaaaaatcttctgagatcagtgccaattcttcc
atggaaattgaggaagttttgagtgaagtaaaacctgaacctatgtgttttatcttgagt
ggacatcgtcttgaaaggaaggagtttcagaaagtaataaagcatttgagaggaagggtt
tgtagagactctcatcaatggtcatatcaggctacacatttcatagcccccgatccagtc
cgtagaactgaaaagtttttttcggctgcagcatctggaaggtggattctcaaatctgat
tatctaacagatagtagtcaggctggaaaactcttggatgtggagccttatgaatggtac
aaaaaaggcctcactgaagacggtgcaatcaatttggaagctcctaggaaatggcggctc
ttgagggagaaaacaggtcatggtgcgttctatggaatgcgtattatcatatacggggaa
tgtattgctccacctctggatactctcaagcgtgctgtgaaggctggagatggaacaata
ctagccacatctccaccttatactaaattcctcaagtctggagttgattttgctgtcgtt
ggtcctggcatgccacgtgctgatacatgggtacaagagttcttaaacaatgagataccc
tgtgtagcggctgattacttggttgagtatgtgtgcaaacctggttatcctcttgataaa
catgttttgtacaatactcatgcgtgggcggaaagatcttttagcaaccttcagagtaaa
gcagaagaagttgctgaagacttaagctcacaggatgattgttctgataatgatatagcc
tgccaagaatgcggatcccgcgatagaggtgaagttatgctcatttgcggtaatgaagat
ggttctagtggttgcggaattggcatgcatacagattgctgcaatcctccattactggat
attccagagggtgattggttttgttcagactgtattaacagtagaaacagcaattcttcg
aataaaaggaaaaagggagtctcagttaagagaaagtga
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