Cucumis sativus (cucumber): 101219793
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Entry
101219793 CDS
T02486
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv00040
Pentose and glucuronate interconversions
csv01100
Metabolic pathways
Module
csv_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101219793
Enzymes [BR:
csv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101219793
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
101219793
NCBI-ProteinID:
XP_004139061
UniProt:
A0A0A0LXR8
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Position
1:complement(28257472..28259873)
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AA seq
393 aa
AA seq
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MAVVVIIFLELLLKSHALAAATGGLTFDIVNLGAKPDCKTDASHALQSAWARACASKVAS
TVYVPKGRFYVQSGNFIGPCNNNSITFLIDGTLVASSDFTVLAKSRTWISFSHINGLSIY
GGVLDGQGTTLWACKNSGINTCSLGATTLEVSDSQNILINGLSSVNSQMYHIVVYDCQDV
KIQGVKVLAASNSPNTDGIHVERSSNVAILNSNISTGDDCISIGPGTSHLWMERLACGPG
HGISIGSLGKWWEEAGVKNVTLKTAHFKGTMNGVRIKSWGRPSNGSAKNILFQHIVLDNV
TNPLIIDQNYCPHNQGCPNQASGVKISNVTYKDIRGTSATEVGINFECSPARPCNQIRLE
DVKLIFKDQIAQAWCEYATGTTLGLVQPSNCLV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgttgttataattttccttgaacttctgttaaagagccacgccttggctgct
gctaccggtggattgacgtttgatatcgtcaatcttggagccaagccggattgtaagact
gacgcttctcatgcgttgcaatctgcatgggctcgtgcatgcgcctctaaagttgcgtct
actgtttatgtgcccaaaggaagattctacgttcaaagtggtaactttatcggaccttgt
aacaacaattctatcacctttctcatcgatggcacacttgtggcttcttcggattttacg
gttctggccaaatcaagaacctggatttctttctcacatataaatggactttccatttat
gggggtgttcttgatggccaaggaactaccttgtgggcttgcaaaaactcagggatcaac
acttgctctcttggcgcaacgacattggaagtttcagattcacagaacatactgatcaat
ggattatcttcagttaacagccaaatgtatcacattgttgtgtatgactgtcaagacgtg
aagattcaaggagtgaaagtcttagctgctagcaatagccccaatactgatggcattcat
gtggagagatcatcgaatgtcgccattctcaattcaaacattagcaccggggacgactgc
atctcaattggccccggaacttcccacttatggatggaaagacttgcatgtggacctgga
catggaatcagcattgggagtttggggaagtggtgggaagaggctggagtgaaaaatgtg
acattaaaaacagctcatttcaagggaacaatgaatggagtgaggattaaatcttgggga
aggccaagcaatgggtctgcaaagaacattctttttcaacacattgttttagacaatgtc
accaaccctctcatcattgatcaaaattactgtccacataaccaaggctgtcccaatcag
gcttctggagtgaagattagtaatgtaacatataaagacatccgtggaacatcagctacc
gaagtaggtataaacttcgagtgtagccctgcaaggccatgcaaccaaataagattggaa
gatgtaaagttgatattcaaggatcaaattgcccaagcatggtgtgaatatgcaacagga
actaccttgggtctagttcaaccttctaattgcttagtatag
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