Cucumis sativus (cucumber): 101219800
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Entry
101219800 CDS
T02486
Name
(RefSeq) E3 ubiquitin protein ligase RIN2 isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101219800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csv04121
]
101219800
Enzymes [BR:
csv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
101219800
Ubiquitin system [BR:
csv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101219800
Multi subunit type E3
ERAD complex
101219800
LMBR1L-GP78-UBAC2 complex
101219800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
CUE
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_16
FAR1_N
zf-HC5HC2H
zf_RING_Vps8_fungal
zf-RING_Vps41
E3_UbLigase_EDD
U-box_ZFPL1
PHD
Endonuclease_7
RINGv
Motif
Other DBs
NCBI-GeneID:
101219800
NCBI-ProteinID:
XP_004140081
LinkDB
All DBs
Position
6
Genome browser
AA seq
586 aa
AA seq
DB search
MGVSYIAISAACTALSFIGLQLWTELSIDNLRSEKIIGENPFKTENAAPVIDLLLSSYVT
VGLLANFALNVFVLLILFLKTLIFVELYSSESRKMVERLVNYVIYKGTFLPLVVPPTKYH
IALWSIWLAVLCSLKMFQALARDRLERLNASPSATSWTYFCVYSVLLLVLIVDLSGIRFC
LMIYRTLGLSLFLLLFFEPLSIAFETLQAILVHGFQLLDIWLHHSAGNNTNCQFSKFFNM
TIPGLLWELKGTLIRNLGFFLDMATLLMALGHYVYIWRLHGMTFNLVDAVLFLNIRALLS
AIVKRIRGFMKLRKALGALNAALPDATSEELQAYDDECAICREPMAKAKKLNCNHLFHLA
CLRSWLDQGLNEYYSCPTCRKPLFVGRQENDVNPRAGETFSDEQLARQISAGLNRQNATI
PTLPAGIFPNQTQNPVEGSPWRSTSLDPSWLHDWASQSMDGAGPSNAARSVGLSRVQMMM
RHLASVGETYAQTSIEDSAWSLWPLNSSQVVAGGSQVPRNVVGRHPGSMGGLNMNVSRAS
NDNLANIIAMAETVREVLPHVPDELIFQDLQRTNSVTVTVNNLLQM
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtcagctatatagcaatttctgcggcatgtacagcattaagttttattggtctc
cagttatggacagaattatcaatagataacctaaggtcggaaaaaataattggcgaaaat
cccttcaagacagagaatgctgcccccgtcattgatttgctcttaagttcctatgttacg
gttggactgctggctaattttgcacttaatgtgtttgttctactcatactatttctaaag
accctaatttttgttgagctgtattcatctgagagtcggaaaatggtggagcgtcttgtt
aattatgtcatttacaagggaacatttctgcctctggttgttcctccaacaaaatatcat
attgcattgtggtctatctggttggctgtcttatgttcattgaagatgtttcaagcattg
gctagagatcgtctcgaacgtctgaatgcatcgccttctgccacctcatggacatatttc
tgtgtatattctgtattattgctggtcctcattgttgacctttctgggataagattttgt
ctgatgatataccgaacactgggtttatctctgtttctcttgttgttctttgagccttta
agcattgcttttgagacattacaggcaattttggttcatggctttcagttacttgatata
tggcttcatcattcagctggaaacaacacaaattgtcagttctctaagttttttaatatg
acaatacctggtttgttgtgggagttgaaaggcactcttatccgaaatctgggatttttc
cttgacatggcaacactactgatggcacttggtcattacgtgtatatatggcgacttcat
ggaatgacattcaatcttgtggatgcagttctcttcttgaacattcgcgccttattaagt
gcaattgtaaagcgaattagaggtttcatgaaattgaggaaagcgttaggtgctttaaat
gcagctcttcctgatgcaacatctgaagagcttcaagcatatgatgatgaatgtgccatc
tgcagggaacccatggccaaggctaagaagttaaactgcaaccacctttttcatcttgct
tgcttgagatcttggttggatcaaggtctaaatgagtattattcatgccctacttgtcga
aagccactttttgtaggcagacaagaaaatgatgtaaatcctcgtgcaggagaaactttt
agtgatgagcagcttgctcgtcagataagtgcaggtcttaatcgacaaaatgctactata
cccaccctccctgctgggattttccccaatcagacacagaatccggttgaaggcagtcct
tggagaagcacaagtcttgatccaagttggttgcatgactgggccagccagagcatggat
ggagctggtccatcaaatgctgctagatctgttggattaagtagagttcagatgatgatg
agacatcttgcatctgttggtgaaacttatgcccagacatccattgaagattctgcttgg
agcctttggcctcttaattcatcacaggttgttgctggtggttcacaagttcctcgaaat
gttgttggaagacatcctggtagtatgggtggtttaaatatgaatgtatctcgtgcttca
aatgacaatctagccaatataattgccatggcagagacagtacgagaagttctgcctcat
gtccctgatgagttgattttccaggacttgcagcgtacaaattctgtcacagtcactgtg
aataatcttcttcaaatgtaa
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