KEGG   Cucumis sativus (cucumber): 101219939
Entry
101219939         CDS       T02486                                 
Name
(RefSeq) HBS1-like protein isoform X1
  KO
K14416  elongation factor 1 alpha-like protein
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101219939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101219939
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     101219939
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 Zn_ribbon_RanBP GTP_EFTU_D4 PBP1_TM
Other DBs
NCBI-GeneID: 101219939
NCBI-ProteinID: XP_011652515
UniProt: A0A0A0LGS3
LinkDB
Position
3:38342243..38350007
AA seq 785 aa
MPRKVSHGLDYDDDYDDYDDYDYYDNDFDVEEKATEKIPVTKEEPKGHKLWRCSICTYDN
EDSFSVCDICGVLRIPLDNNRNTQDDRTVENICKDSGVSKMAKSLFASLPNQIPKRAVKL
QEQDDKIVEEREENIHKIGNIQGHLHEFHNAFSTCSHFHTNIVPFKFDIPSPDDVVSNGL
RSSKVGLKAANHNDFNSLIFSSDTTKISANNAALTSKSAHSASTLSQMSKSGNIGDKQLN
TKGSANSGISIGKKTMVIEELNTSISVTKNLQSRDNRSSGTSSSKSAGKFDSMDESSNPS
VDWERSQSLAGGLNNMVLNVKSAYANYISGIGKTSNPQYKHDKWMLPDKAVDTLTQLNLA
IVGHVDSGKSTLSGRLLHLLGRVSQKEMHKYEKEAKSMGKGSFAYAWALDESAEERERGI
TMTVGVAFFDSKRYHIVVLDSPGHKDFVPNLISGATQADAAVLVIDASVGAFEAGMDSSK
GQTREHVQLIRSFGVDQIIVAVNKMDVVEYSKDRYEFIKLQLGTFIRSCGYKDSSLSWIP
LSAMANQNLVTAPSDVHFLSWYRGPNLLEAIDSLQPPTREFSKPLLMPICDVVRSLSLGQ
VSACGKLEAGALQSGSKVLIMPSGDKATVRTLERNSQACKIARAGDNVTVTLQGVEPSSV
MSGGVLCHPDFPVAAAKHLELKILTLEYATPILIGSQLEIHIHHVKEAARVARIVSLLDS
KTGKVTKKAPRCLSAKQSAVIEVVLQSPVCVEAFSTSRALGRVFLRTMGRTIAVGIVTQL
IGGSQ
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgcctcgcaaggtgagccacgggttagattacgatgatgattacgacgactacgacgat
tacgattattatgataacgatttcgacgtagaagaaaaagcaacagaaaaaatacctgtg
actaaggaagaaccaaaagggcataagctttggcgatgctcgatttgcacttacgacaac
gaagacagtttttctgtctgtgatatatgtggggttctgcgcatccctctggacaacaac
agaaatactcaagatgatagaacagttgaaaacatctgcaaagactctggagtatcaaaa
atggccaagtctctctttgcatcgttgccaaatcagatacccaaaagggctgtaaaattg
caagaacaggatgataaaattgtggaggaaagagaagagaacatccacaagattggaaat
atccagggccatttgcatgaattccataatgcttttagtacctgtagtcatttccatact
aacatagtccctttcaagtttgatattccatccccagatgatgtggtttctaatggattg
cgttcctccaaagttggtttaaaagcagccaaccacaacgacttcaactctttaatattt
tcttcagacaccactaagatatctgcaaacaatgcagcattgacttcaaaaagtgcacat
agcgcgtctactttatcgcaaatgagtaaatcaggcaatataggagataaacagttgaat
accaaaggttcagccaactcagggatctcaattggaaaaaaaacaatggttattgaagaa
ctcaatacatcaattagtgtaacaaaaaatttacaatcacgtgataaccggtcatcaggc
acttcctcatcaaagtcagcaggcaaatttgacagcatggatgagagcagcaacccttct
gtggactgggaaaggtcccaaagtcttgccggtggtttgaacaacatggtcctaaatgtt
aaatctgcctatgcaaattatattagtgggattgggaaaacatcaaatccgcagtataag
catgataagtggatgctacctgataaggctgtagatacgctgactcagctgaatcttgcc
atagttggtcatgttgattctggaaaatctacactctcaggaagattgctgcacctattg
ggacgtgtatcccaaaaagaaatgcacaaatatgaaaaagaggcaaaatcaatgggcaag
ggctcctttgcttatgcctgggcactggatgagagtgcagaggaaagggagagaggaata
actatgactgttggtgttgctttttttgattccaaaagatatcatattgttgtgcttgat
tcccctggccataaagattttgttccaaacttgatatctggggccacacaagctgatgct
gcagttcttgttatcgatgcatctgttggtgcatttgaggctggtatggacagttcaaag
gggcaaacaagggaacatgtgcaattaatcaggagctttggtgtagatcagattatcgtt
gcagttaacaaaatggatgtggtggagtattccaaagatcgatatgagtttattaagctg
caactgggaacctttattcgttcatgtggttataaagattcatcattgtcttggattcca
ttgagtgccatggcaaatcagaatctggtgactgccccttctgatgtacattttttatcc
tggtaccgtggacctaatcttttggaggcaatagattctcttcaaccacccactcgagaa
ttctctaagccactgcttatgccgatatgcgacgttgttagatcactttcactaggacaa
gtgtctgcctgtggaaaattggaagctggagctctccagtctggatctaaggttctaatc
atgccatctggagataaagcaaccgtgcgaactttggaacgcaattctcaggcttgcaaa
atcgcaagagcgggggacaacgtgactgttactctacaaggagttgaaccaagtagcgtg
atgtctgggggtgtcctatgccatcctgatttcccggtcgctgctgcaaaacatttggaa
ttgaagattctcaccttggaatatgcaacaccgatattaataggatctcagttggaaatt
catatacaccatgtgaaggaggctgctagagttgcaagaatagtctcattgctcgattca
aagacggggaaggtcacgaagaaggcaccacgctgtctcagtgctaaacaaagcgcagtg
attgaggttgttttacaaagccctgtttgcgtcgaagcattctcaactagtcgagcactt
ggtcgggtatttctgagaacgatgggaagaaccatagccgtcggcattgtgacccaacta
atcggaggctctcaataa

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