Cucumis sativus (cucumber): 101220035
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Entry
101220035 CDS
T02486
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101220035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csv04131
]
101220035
Membrane trafficking [BR:
csv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101220035
Hops complex
101220035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
Clathrin
VPS11_C
zf-C3H2C3
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_6
zf-RING_5
Beta-prop_WDR3_1st
Motif
Other DBs
NCBI-GeneID:
101220035
NCBI-ProteinID:
XP_004140003
UniProt:
A0A0A0KCP0
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All DBs
Position
6:complement(7669087..7673921)
Genome browser
AA seq
957 aa
AA seq
DB search
MYQWRKFEFFEEKLAGRCTIPEEIREKKIQCCSSGRGKVVIGCDDGSVNLLDRGLKFSYG
FQAHSSSVSFLQQLKQRNFLVTVGEDVQVAPQHSAMCLKVFDLDKIEPEGSSATSPECIG
ILRIFTNQFPEAKITSFLVLEEAPPILLIAIGLDNGCIYCIKGDIARERINRFKHQVDIS
NKNQTSITGLGFRVDGQALQLFAVTPDSVSLFSLHSQPPKGQTLDHIGCGVNGVTMSDRS
ELIIGRPEAVYFYEVDGRGPCWAFEGEKKLVGWFRGYLLCVIADQRNNKNTFNVYDLKNR
LIAHSLVVKNVSHMLCEWGSIILIMDDQSALCIGEKDMESKLDMLFKKNLYTIAINLVQS
QQADAAATAEVLRKYGDHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLDAQRIYNLTNY
LENLHEKGLASKDHTTLLLNCYTKLKDVNKLNVFIKNEDGAGEHKFDVETAIRVCRAANY
HEHAMYVARRERKHEWYLKILLEDLGRYDEALQYIASLEPSQAGVTIKEYGKILIAHKPR
ETIDILMKLCTEDGESLKERASNGTYLFMLPSPVDFLNIFIHHPQSLMEFLEKYTNKVKD
SPAQVEINNTLLELYLSNDLNFPSMSQVSNGRNISLERSGATLMPAESNTKLSTEYTDRM
KDKDRLERQEKGLRLLKSGWPSELENPLYDVDLVIILCEMNAFREGLMYLYEKMKLYKEV
IACYMQTHDHEGLIACCKRLGDSGKGGDPSLWADLLKYFGELGEDCSKEVKEVLTYVERD
DILPPIIVIQTLSRNPCLTLSVIKDYIARKLEQESKMIEEDRRAIEKYQEDTLAMRKEIE
DLRTNARIFQLSKCTTCTFTLDLPAVHFMCMHSFHQRCLGDNEKECPECAPEYRKVVEMK
RSLEQNKDQDQFFQQVKSSKDGFSVIAQYFGKGIISKTSNGTVNATNPENPSSTNGF
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaatggaggaaattcgagttcttcgaagagaaactagccggaagatgcacaatt
cctgaagagataagggaaaagaagatccagtgttgctccagcggcagagggaaggtggtg
atcggttgcgatgacggtagcgttaatttacttgatcgtgggcttaagttcagctatgga
tttcaagctcattcctcctctgtatcttttcttcaacagctcaagcaacgcaactttcta
gtcactgttggagaagacgtgcaagtagctccgcagcattctgctatgtgtctcaaggtt
tttgatcttgataaaattgagccggagggctcaagtgcaactagtcccgagtgcattgga
attttgaggatatttactaatcaatttcccgaggcaaagatcacatcatttctggttcta
gaggaggcacccccaatactacttattgctattggccttgataatggttgcatatactgc
atcaaaggagacattgcacgtgaacgtatcaatcgtttcaagcatcaagtggatatctca
aacaagaaccaaacatctattacggggttagggtttagagttgatggtcaagctcttcag
ttatttgcagtaactcctgattcagtgagtttattcagcctgcacagtcaaccaccaaag
gggcaaactctggatcatattggatgtggtgtgaatggtgttacaatgagtgatcgctcg
gagttaataatcggtcgtcctgaggcagtttatttttatgaagttgatggacgtggtcct
tgctgggctttcgaaggagaaaaaaaacttgtaggatggtttcgtggataccttctctgt
gtgattgcagatcagagaaataacaagaacactttcaacgtttatgacctgaagaatcgt
ctgattgctcatagtctagttgttaaaaatgtttctcacatgctctgtgagtggggtagt
attatacttataatggacgaccaatctgctctatgtattggggaaaaggacatggaaagc
aaattagatatgctttttaaaaagaatttgtacactatagctataaatctcgttcaaagt
caacaagctgatgctgctgcaactgcagaagtgcttagaaagtatggggaccatctatac
agcaaacaagattatgatgaggctatggctcaatatatccatactattggacatcttgag
ccttcttatgttatacagaaatttcttgatgctcagcgaatctataacctcactaattac
ttggaaaatttgcatgagaaagggcttgcttctaaagatcacaccacacttctactaaac
tgctataccaaattgaaggatgttaataagctaaatgtatttattaagaacgaggacggt
gctggagagcataaatttgatgtcgagactgcaataagggtttgtcgtgctgccaattac
catgaacatgccatgtatgttgctagaagggaacgaaagcacgaatggtaccttaagatc
ttacttgaagaccttggaagatatgatgaagccttgcaatatattgcaagccttgagcct
agtcaagctggggtgacaattaaggagtatggaaagattctgatagcacacaagccacgt
gagacaattgatattctcatgaagctctgcacggaggatggtgagtcattgaaggaaagg
gcctcaaatggcacatatttatttatgttaccatctcctgttgactttcttaatattttc
attcatcacccacagtcacttatggaattccttgaaaagtatacaaacaaggttaaggac
tctcctgctcaagttgaaattaacaatacactgttggagttgtacttgtcaaacgatttg
aactttccatcgatgtcccaagttagcaatgggcgaaacattagtcttgaaagatcagga
gcaacattgatgccagctgagtccaatactaaattgagcactgagtatacagatcgtatg
aaggataaagaccggcttgaaaggcaagagaagggattacgtttgctaaagagtggatgg
ccatcagaactggaaaatcccctctatgatgttgatcttgtaattattctgtgtgaaatg
aatgcatttagggaaggacttatgtacttatatgaaaagatgaaactttataaagaggtt
atagcttgctatatgcaaactcacgaccatgagggtttgattgcttgctgtaaaagattg
ggcgattcaggaaagggaggcgacccttctctatgggcagatctattgaagtactttggg
gaacttggagaagattgttccaaagaagtaaaggaagttttgacctatgttgaaagggat
gatattttgcctcctattatagttattcaaacactgtcaagaaatccatgcctcacactt
tctgtcatcaaggactatattgcaagaaagctcgaacaggaatccaagatgattgaagag
gatagacgagcaattgagaagtaccaggaagacacattggcaatgagaaaagaaattgaa
gatctcaggacaaatgcaagaatttttcagcttagcaagtgcactacatgcacgttcact
cttgatctccccgctgtacacttcatgtgtatgcattcattccatcagcgttgtttgggg
gataatgaaaaagaatgtccagagtgtgctccagaatacagaaaagttgtagagatgaag
agaagcttagagcagaataaggatcaggatcaattcttccagcaagtgaagagttcaaaa
gatggtttttctgtgattgcccagtactttggcaagggaatcattagcaaaactagtaat
ggaactgtgaatgctacaaacccagagaatccttcttcgacaaatggcttttaa
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