KEGG   Cucumis sativus (cucumber): 101220087
Entry
101220087         CDS       T02486                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03020  RNA polymerase
csv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101220087
  09124 Replication and repair
   03420 Nucleotide excision repair
    101220087
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csv03021]
    101220087
   03400 DNA repair and recombination proteins [BR:csv03400]
    101220087
Transcription machinery [BR:csv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     101220087
  RNA polymerase III system
   RNA polymerase III
     101220087
  RNA polymerase I system
   RNA polymerase I
     101220087
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101220087
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 101220087
NCBI-ProteinID: XP_004152137
UniProt: A0A0A0KYV5
LinkDB
Position
4:1638782..1642632
AA seq 144 aa
MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMAL
APTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRISESSGHGGKAEIDASFGGLLMM
LKGDPSHCSKFELDQRLFLLIRKV
NT seq 435 nt   +upstreamnt  +downstreamnt
atggttgagcttctgtttgacgatatttttaagattgagcgattaaaccctgatggtaaa
aagtttgataaagttactcgaatagaggcaaagagcgagaagtttgacatgttcatgcat
ctagatataaattcagagatataccccctgaaagaaggtgagaagttctcgatggcacta
gctccaactctgaatcttgatggaacccctgacactggatattttcttcagggcaatcgg
aagtctcttgcagacagatatgaatatgtcatgcaagggaagctgttcagaatttcagaa
agttctggccatggcggaaaagctgaaatagatgcttcttttggtggacttttgatgatg
ctgaagggagacccctcacattgcagcaagtttgaacttgaccagaggctatttcttctc
atcaggaaggtgtga

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