Cucumis sativus (cucumber): 101220196
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Entry
101220196 CDS
T02486
Name
(RefSeq) nucleolar protein 6 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101220196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csv03009
]
101220196
Ribosome biogenesis [BR:
csv03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101220196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D4
Nrap_D5
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
DksA-like_N
Motif
Other DBs
NCBI-GeneID:
101220196
NCBI-ProteinID:
XP_031742945
LinkDB
All DBs
Position
6:6833602..6844643
Genome browser
AA seq
1049 aa
AA seq
DB search
MEMKVKELLKEFQLDYSPALHKLVESTVSDIKKAIELIPDDLKVTAAAAPGFIRDIGADK
VEFKFRKPKSIKIGGSYAFQGIAKPDVNVDLLVGLPKECFHEKDYLNYRYHAKRFLYLCT
IKKYLNSSSMFSKVEYSTLQNEARKPVLIIHPALEELKVAPGFFVRIIPTIEASYFSISK
LNLKRNNIHALNQGSLLPATPKYNSSILEDMYFEDTAEMVKKPFLESKSLVETLILLKVW
ARQRAPIYVHDCLSGFLIAVILSYLIMHNIINHSMTAIQMFRVAVKFIASSDLWKRGLYF
KLGPQSIISKEEKKQYKDLFPVVICNPSSNFNIAFRISQSGLAELQDEAAMALVCLDKCS
NGGFEEVFMTKIDFAVKYDHCIRLNLRGQDKLYASGFCIDDECWRLYEQKIHGVLSQGLT
DRAKFIRVSWRNTEPGCNIENGLSAFDMQPLLVGISISSVEKAFRVVDIGPNADDKEDAL
KFRRFWGEKAELRRFKDGRIAESTVWETDQWTRHLILKRIVEYLFVRHLSPMSTNCIMHA
VDQIDFSLLHGSRDPITFSGTLLEAYEVLSKRLRSIEDIPLKVSAVQPLDSAFRYTSVYP
PEPHPLAEEKASDRRTLKTFAPSCIKPLEVMIQLEGSGNWPTDEVAIEKTKTAFLLKIGE
SLQNDWGMTCIASEDSVNVLVSGYAFRLKIWHERGLSLLSKESGNDLSNRTSLTDKQLFI
QSQHSSMISGLQARHSIYGPVVRLAKRWIASHFFSACLVEEAVELLVASIFLKPLPFHAP
LSRITGFLRFLRLLSEYDWTFSPLVIDINNDLGANEEKEIADKFNMTRKDLQENLQSGIP
AMFLATAYDKASEAWTKFSPKVSELKRLAAYARSSADLLTRLMLQHQVDSCLWESLFRTP
LTNYDAVILLHRDKLPYPQHLLFPSELNQGTHVAKGNPTKIFTPFLSPRNLKASSENIKD
RLLVNFDPLRCYIEDLQKEFSNTFNLWYDSLGGDAIGVTWGQRSSKKRERDDEDVAEEKE
PAEVLKSAGETGKGLMRSIYLLKAPRLTT
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaggtcaaagaacttttaaaggaatttcagcttgactactcccctgcactg
cataagctcgtcgagagcacagtttcagatataaaaaaagcaattgaacttattcctgat
gacttgaaggttactgcagctgcagctccgggttttatcagggatattggcgcagacaaa
gtggaattcaaatttaggaaaccaaaatcaattaagattggtggcagttatgcctttcaa
ggcattgcaaaacccgatgtaaatgtggatcttttagttggcttgccaaaggagtgcttc
catgagaaagactacctgaattaccggtaccatgctaaaaggttcctttacctttgcaca
atcaagaagtatttgaactcatcttcaatgttttcaaaggttgaatattctacacttcag
aatgaggctcgaaaacctgttttaatcattcatccagctttggaggagctgaaggtagct
cctggattttttgtcagaataattccaacaatagaagcatcctattttagcatttcaaaa
ttgaatctcaagcgaaataacatccatgccttgaaccaagggagcttactgccagctaca
cctaagtataactctagcattttggaagatatgtacttcgaagatactgcggaaatggtt
aagaagccttttcttgaatcaaaaagtttggtagaaaccttaattctacttaaggtttgg
gctcggcagagggctccaatatatgttcatgattgcttgagtggatttttaatagctgta
atattatcatacctcattatgcacaacataataaatcattcaatgacggcgatccagatg
tttcgtgttgcagtaaaatttatagcctcttcagatttatggaagcgtgggctctatttt
aagcttggacctcaaagtattatttcaaaggaggaaaagaagcaatataaagatctgttt
cctgtggttatatgcaatccatcttccaactttaacattgcttttcgaatatcgcaatca
ggtttagctgagcttcaagatgaggctgcaatggcacttgtatgtttggacaaatgcagt
aatggtggatttgaagaggtttttatgaccaaaattgactttgctgttaaatatgaccat
tgtattagattgaatttgaggggacaagataagctatatgcatcaggcttttgtattgat
gatgagtgctggagactatatgagcagaaaatacatggggttttaagtcaaggcctgact
gatagagcaaaattcattcgtgtttcctggaggaacaccgagcctggatgcaatattgaa
aatggattatcagcatttgatatgcaaccattgcttgttggaatttcaataagctctgtg
gaaaaagcctttcgtgtagttgatattggtccgaatgctgatgacaaagaagatgcccta
aaatttcggagattttggggtgaaaaagctgagctcaggagatttaaagatggcagaatt
gcagaaagcacagtttgggaaactgatcagtggacaagacatctcattttaaaaagaatt
gtggaatatctttttgttcgacacctttcaccaatgtcaaccaactgtattatgcatgct
gtggatcagattgatttctccctgcttcatggttctcgagatccgataacattttctgga
actttgcttgaggcatatgaagttttatcgaagcgtttacggtcaattgaagacattcct
ttgaaggtgtctgctgtacagcctttagactcagccttcaggtatacatctgtctatcct
cccgaacctcacccactagctgaagaaaaagcaagtgatcggcgaacactgaagacattt
gctccatcctgcatcaagccactcgaagttatgattcagttggaaggctctgggaactgg
cctactgatgaggttgcaattgaaaaaaccaaaacagccttccttcttaaaattggagag
agtctacagaatgattggggtatgacatgcattgcttcagaagattctgttaatgtactt
gtttctggttatgccttccgtctaaaaatttggcatgaaagaggcctgagtttgttgagt
aaggaatctggaaatgatttatcaaatcggacctccttgacagataaacaactttttatt
caaagccagcattctagcatgattagtggactacaggctcgtcactcaatatatggaccg
gttgttaggttggccaaacgatggatagcctcacatttcttttcagcatgcttggtagag
gaagcagtcgaactgttggtagcttcaattttcctaaagcctctacccttccatgcacca
ctttctcgaatcacaggttttttaaggttcttaagattattgtcggaatatgattggact
ttttctccattggttattgacataaacaatgatttgggtgcaaacgaggagaaagaaata
gctgataaatttaatatgacacgaaaagatttgcaagaaaatctacaaagtggaattcct
gccatgttcttagcaacagcttatgacaaggcatccgaggcttggaccaagttttcacca
aaagtttcggagctcaaaaggttggctgcttatgctagaagcagcgcagatttgttgaca
agactaatgttgcagcatcaggtcgattcttgtctgtgggagtcccttttccgaactcca
ttgacgaactatgacgctgttattcttctccatagagacaaattaccttacccacaacac
cttctcttcccatctgaacttaaccaaggaacccatgtcgcaaaagggaatcctaccaaa
atcttcactccattcttatctcctagaaacttgaaagcaagttctgaaaacatcaaggac
agacttttggtaaattttgatccattaaggtgttatatcgaggatctgcagaaagaattc
tccaacactttcaacttatggtatgactctttgggaggtgatgcaattggtgtaacatgg
ggacaacgcagttctaagaagcgtgaacgtgacgacgaagatgtggcggaagaaaaagaa
ccagctgaagtgctaaaatctgctggtgaaactggtaaaggtttaatgaggagtatctac
ctactcaaagctccaaggctcaccacctga
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