KEGG   Cucumis sativus (cucumber): 101220231
Entry
101220231         CDS       T02486                                 
Name
(RefSeq) LOW QUALITY PROTEIN: la-related protein 1A
  KO
K18757  la-related protein 1
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csv03019]
    101220231
Messenger RNA biogenesis [BR:csv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     101220231
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 101220231
NCBI-ProteinID: XP_004149652
UniProt: A0A0A0KWS8
LinkDB
Position
4
AA seq 881 aa
MVMVDTEVTDDNKDTNGRKSPWKTPAAVDAKDTDAPVMGADSWPALADAQRPKSIDATTS
AKSSDSGEVSDGVAALQSPSSGAQGGYAQKSPASRNSSYSHKNFQSHHQKPGSKRNPNGA
PHVSVPLPYHQPPMPPLFPPILHPPHLAVPGYAYQPRPVAGVEVHMIKPGNETSVQAFVP
PVEPPPRGDPSGYVVGIHNRRPNMQESGVHWNHGWHHQRGFNPRDNMSMQHGAGPRPFIR
PPFFSPAPGFMVGPSFPGHGPMYYVPVPPPDAIGRPQFIPHPINPRASMLPPDMLALRTN
IIKQIEYYFSDENLKTDHYLISLMDDHGWVPISAIAEFKRVKKMSTDISFILDSLHSSAN
VEVQGDKVRKRDEWSKWVPVSADSKSTLNVETSSIPVDESTNSLVDENASDGSRVLASND
NIKSSLLQGCSREQFSSRDSPEVANLDIVEEHSSGTVPPQGIKISSNVGAHDVDDLSSQF
SSTFMLDEELEIEQKAIKKDDLTSNGRIDEDDDEIAVNDQDVQRLIIVTQNRAIEKRSTS
GGKESKSISKELASTINDGLYFYEQVLEKKRSNRKKSKCNSENREGTSRLSSSATGSARS
KPSENSAGYCGLDEIGNASPRKKQTKTFPKQQSSHKQRFFSSNFRNHGTSRNSLGIVAES
PPSNSVGFFFGSTPPDSTSSRPSKLSVSPHGNFLGNSPPVGSLPKSFPPFQHPSHQLLEE
NGFKQQKYLKFYKKCLSDRKKLGIGCSEEMNTLYRFWSYFLRDMFVDSMYNDFRKYALED
AASNYNYGMECLFRFYSYGLEKEFREVLYSDFEQLTLEFFQKGNLYGLEKYWAFHHYRRQ
RDQKEPLRKHPELDKLLREEYRSLDDFRAKEKAANTKEDGN
NT seq 2646 nt   +upstreamnt  +downstreamnt
atggtgatggtggataccgaggttactgacgacaataaagacactaatggccgtaagtct
ccttggaagaccccggctgctgtcgatgccaaggatacggatgcgcctgtaatgggagct
gattcttggcctgcacttgctgacgcccagcgccccaaaagtatcgatgctactacttct
gccaagtcttctgattcaggggaggtttctgatggagtagctgctcttcagtctccttct
tcaggagctcagggaggatatgcacaaaagtcacctgcctctcggaattctagttattca
cacaagaatttccaatcacatcatcaaaaaccaggttctaagcgcaatccaaatggtgct
cctcatgtttctgttccattaccttatcatcaaccaccaatgcctccactttttccaccc
atattacatcctccacatcttgctgttccgggatatgcttaccagcctcgtcctgtagct
ggggttgaagtacatatgattaagcctggcaacgagacatcagtacaagcttttgttcca
cctgttgagcctccaccacgtggtgatccgagtggttatgttgttggtattcataataga
agacctaatatgcaggagtctggtgttcattggaaccatggctggcatcatcaacgggga
tttaatccaagagacaacatgtccatgcaacatggtgctggaccacgccctttcatacga
cccccttttttctctccagctcctggcttcatggttggtccaagttttcctggacatgga
cctatgtactatgttccggttccacctcctgatgcaattgggagacctcagttcattcca
caccctatcaatccaagggcttcaatgcttcccccagatatgctagcacttcggactaac
ataataaaacaaattgagtactattttagcgatgaaaatctgaagactgaccattatcta
atatctttgatggatgatcatggatgggttccaatatcagccattgctgaattcaaaagg
gtcaagaaaatgagcactgacatttcgtttattcttgattctctgcattcatctgcaaat
gttgaagttcagggagacaaggtgcgaaaacgtgatgaatggtcaaagtgggttccagtt
tctgcagactctaaatcaacattaaacgttgagacctcatccattccagtggatgaaagt
accaactctttggtggacgagaatgcttcagatggttctagggtgctggcatcgaatgat
aatatcaaatcttcactacttcaaggttgttctcgggagcagttctcaagcagggacagc
ccagaagtagctaatctagacatagtggaagaacattctagtggaactgttcctcctcaa
ggcataaagatttcatcaaacgttggtgcacatgatgttgatgacctttcaagccaattt
tcaagcacttttatgctcgatgaagagctagagattgaacaaaaagcgataaagaaagat
gatttgacttcaaacggaaggattgacgaagatgatgacgagattgctgtcaatgatcaa
gatgttcagagacttattattgtcactcagaatcgtgccatcgaaaaaaggtctacaagt
ggaggcaaagaatcaaaatcaatatctaaagagcttgcttcaacaataaatgatggcctt
tacttctacgagcaagtactggaaaaaaagcgatctaatcgaaaaaagagcaagtgcaac
tcagagaatagggagggaacctcacgattatctagcagtgctacaggatcagcacggtca
aaacctagtgaaaattctgcaggatactgtggtttggatgaaattgggaatgctagtccc
aggaagaaacaaactaaaaccttccctaaacaacaatcttcacataagcaacgctttttc
tccagcaactttagaaatcatggaacgagtcggaactctcttggcattgtagcagagagt
ccacctagtaattctgtaggttttttctttggttctacccctcctgatagtacaagctcc
agaccgtcgaaactgagtgtttctcctcatggaaacttccttggcaatagtccaccagtg
ggttcccttcccaagtcttttccaccctttcagcatcccagtcaccaacttctagaagag
aatggttttaaacagcagaagtaccttaaattttacaaaaagtgcttgagcgatagaaag
aagttgggtatcggttgcagtgaggaaatgaatactctatatcggttttggtcttacttt
cttagagacatgtttgttgattcaatgtacaatgatttccgaaaatatgcactggaagat
gctgcttccaactataattatggaatggagtgccttttcaggttctacagttatggtttg
gaaaaagaatttagagaggtgctatactcagactttgaacagcttacccttgagttcttc
cagaaaggaaatctttacggcctcgagaaatactgggcatttcaccactatcgtagacaa
cgagatcagaaagaacccctaagaaagcatccggaattggacaagttacttagggaggaa
taccgtagcttggatgatttccgtgcaaaagagaaggcagcaaatacaaaagaggacggg
aactag

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