Cucumis sativus (cucumber): 101220502
Help
Entry
101220502 CDS
T02486
Name
(RefSeq) protein SMG7
KO
K14409
protein SMG7
Organism
csv
Cucumis sativus (cucumber)
Pathway
csv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101220502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csv03019
]
101220502
Messenger RNA biogenesis [BR:
csv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
101220502
mRNA cycle factors
Common to processing body (P body) and stress granule
101220502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
Motif
Other DBs
NCBI-GeneID:
101220502
NCBI-ProteinID:
XP_004139063
UniProt:
A0A0A0LXI6
LinkDB
All DBs
Position
1:complement(28430753..28438441)
Genome browser
AA seq
972 aa
AA seq
DB search
MAKMSASASSSWERAQRLYEKNIELENRRRRSAQARIPSDPNAWQQIRENYEAIILEDYA
FSEQHNIEYALWQLHYKRIEELRGHLTAGSNNAQGVPTRPDRISKIRLQFKTFLSEATGF
YHDLILKIRAKYGLPLGFFSEDADNRMATDKDGKKSADMKKGLISCHRCLIYLGDLARYK
GSYGDVDSKNREYTAASSYYLQAASLWPSSGNPHHQLAILASYSGDELVAVYRYFRSLAV
DSPFSTARDNLIVAFEKNRHSHSQLSGIAKTPPKKESPLRFSGKGRKGEVKLATKDSSTE
PPKESVLSPQDLFKSFCIRFVRLNGILFTRTSLETFTEVLSLVISNFSELLACGPEEELL
FGTDTAENSLIIVRIVAILIFTVHNVNKETEGQTYSEIVQRAVLIQNAHLAVFELMGSIL
DRCSQLRDPLSSFFLPGLLVFVEWLACCPEIAANSEVDDKQATARSKFWNLCISFFNKLL
SSGSVSLDDDEDDTCFFNLSKYEEGETENRLALWEDLELRGFLPLLPAQTILDFSRKHSG
SDGNKEKVARIKRILAAGKALASVVKIDQEPIYYNSKVKMFCTGVEPQVPNDFVVPLSSS
MIPSPGSAIQETQVEKTNNLAVSKPSSQLVLEGEEEDEVIVFKPLVAEKRMELADSYRSG
YEGLLLGRNSSGGDLRSYGGVMTSSDDVYQSNGFESSSQAPVTAANINTLHWQTIQANAS
KWPLEQEACLVDSLQSLRLLENGNGMKSDLQNDVSMFNPAAHLMPIKQAVNNDVFYSDKM
PVGALVQSRNDVPASFGGIIDPMTTGAFSSLQTGLRKNPVGRPVRHLGPPPGFNHVPTKH
ANDSLPGSEFRSENQVMDDYSWLDGYQLPSSTKDSANAVHLTSHMNAQQIGVSNMLSATI
NFPFPGKQVPNVQSPIGKQKGWPDFQVLEQLRQHNEQHLQPHQQLVNGGNQHFNSLPEQY
PGQSIWTGRYFM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatgtctgcttccgcttcttcatcgtgggagcgtgctcaacgcctttatgaa
aagaatattgaattggaaaatcgacgtagaaggtcagctcaggctcgaattccgtcagat
cccaatgcatggcaacaaatacgtgaaaattatgaagcaataatccttgaggattatgct
ttttctgaacagcacaatattgaatatgctctctggcagttgcattacaagcgaattgag
gagcttaggggacatttgactgctggttctaacaatgctcaaggcgtgcctacaaggcct
gacagaatttcaaaaataagattgcagttcaaaacatttctttctgaagctactggattt
taccatgatttaatattgaaaatcagagcaaagtatgggctccctttgggtttcttctcg
gaggatgcagacaaccgtatggctacagataaagatggaaagaagtctgctgacatgaag
aaaggtctcatttcttgtcatcgttgtttgatatacttgggtgatcttgcacgctacaaa
gggtcatacggggatgttgattcaaagaatcgggagtatactgcagcttcaagttactac
ctgcaagcagcatcactttggccatcaagtggcaatcctcatcatcagcttgcaatatta
gcttcgtactcaggagatgagttggttgctgtttatcgatattttcgtagtttggctgtt
gattccccattttctactgccagagataatttgattgttgcgtttgagaagaatcgtcat
agccattcccagctgtcagggattgctaaaactcctccaaagaaggaatcacctcttcga
tttagtggaaaaggacggaagggagaagtaaagcttgcaaccaaagattctagcactgaa
cccccaaaggagagtgtgttatctccacaagatctttttaaatccttttgcattagattt
gttcgtctaaatggaattcttttcacacgcacaagcctagagacctttacagaggttctc
tcattggttatcagtaatttctctgaacttttggcttgtggacctgaagaggaactgctt
tttggaacagatactgctgagaacagtctcattatagttagaattgttgcaattcttata
ttcactgttcacaatgtgaataaagaaactgaaggacagacatattcagaaattgtacaa
cgggctgtgttgatccagaatgcacatcttgcagtcttcgaattgatgggctctattcta
gatagatgttcccagttgcgtgatcctttgtcaagtttttttctgcctggccttctagtt
tttgttgaatggttggcatgttgtccagaaattgcagcaaacagtgaagtggatgataaa
caggcaactgctagatcaaagttttggaacctttgcatctccttcttcaataagcttttg
tcaagtggttctgtgtctctagatgatgatgaggatgacacatgcttttttaacctcagt
aaatatgaagagggcgaaactgaaaatcgacttgcattgtgggaggatcttgaattaagg
ggattcttgccacttcttcctgcacagacgatattggatttttcaaggaagcattctggg
agtgatggcaacaaagagaaggttgctcgcattaaaaggattctggctgcggggaaggct
ttagcaagtgtagtcaagattgatcaggaaccaatatactacaattcaaaggtgaaaatg
ttttgtaccggtgttgaacctcaagtgccaaatgattttgtcgttccattgtcttctagc
atgatccctagtccaggcagtgcaattcaagaaactcaagttgagaaaacaaacaatttg
gctgtcagtaagccaagttcacagctagttttggaaggggaagaggaggatgaagtaatt
gtcttcaagcctttagttgcagagaagcgaatggaacttgctgattcatatcggtctggt
tatgagggtttgctacttggaagaaattcttctggaggggatctaagatcctatggtggt
gtgatgacctcttctgatgatgtttaccaatcaaatggttttgagtcaagttctcaggca
cctgtgactgctgccaatattaacaccctccactggcaaacaattcaggcgaatgcatct
aaatggccacttgaacaggaagcttgtcttgttgacagcttgcaaagtttgaggttattg
gagaatgggaatgggatgaaatctgatcttcagaatgatgtaagcatgttcaatcctgca
gctcacttgatgcctatcaagcaagctgttaataatgatgttttttacagtgataaaatg
cctgtaggagctcttgtacaatctaggaatgatgtacctgcttcgtttggaggcatcatt
gatccaatgactacaggtgcattttctagccttcaaacagggttgaggaaaaacccagtt
ggtcgaccagttaggcatcttggacctcctcctggattcaaccatgttccaactaagcat
gctaatgattcccttcctggttcagagtttagaagtgagaatcaggtgatggatgattat
agctggttggatggatatcagctgccctcttctacaaaagactctgctaatgctgtgcat
ctcacctctcatatgaatgctcagcaaattggtgttagtaatatgttgagtgcaacaatc
aacttcccttttcctggaaaacaagttccaaacgtgcagtctccaataggaaaacagaaa
ggctggcctgattttcaggtgcttgagcagctaagacaacacaatgaacaacatttgcag
cctcatcaacagcttgtgaatggtggtaaccaacactttaattcgctgcctgagcaatat
ccagggcagtctatatggacaggtcgttacttcatgtga
DBGET
integrated database retrieval system
